RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SGPL1O95470 568 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 BCRP11274 1271 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 INPP5BP32019 993 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 KCNH4Q9UQ05 1017 aa16.35■□□□□ 0.21
CHRNA1-203ENST00000409219 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 TEKT1Q969V4 418 aa16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 ZNF341Q9BYN7 854 aa16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
CHRNA1-203ENST00000409219 FCGRTP55899 365 aa16.33■□□□□ 0.2
CHRNA1-203ENST00000409219 FKBP1CQ5VVH2 108 aa16.33■□□□□ 0.2
CHRNA1-203ENST00000409219 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
CHRNA1-203ENST00000409219 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.2
CHRNA1-203ENST00000409219 VCANP13611 3396 aa16.33■□□□□ 0.2
CHRNA1-203ENST00000409219 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
CHRNA1-203ENST00000409219 ZDHHC15Q96MV8 337 aa16.32■□□□□ 0.2
CHRNA1-203ENST00000409219 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
CHRNA1-203ENST00000409219 ADCY3O60266 1144 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 INHAP05111 366 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 CYP2C8P10632 490 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 ELNP15502 786 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 GDF15Q99988 308 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CHRNA1-203ENST00000409219 F6X3S4 739 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 GPAT2Q6NUI2 795 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 Q7L0L9 218 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 FBXO33Q7Z6M2 555 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 DEFB123Q8N688 67 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 TBC1D22AQ8WUA7 517 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
CHRNA1-203ENST00000409219 FLT3LGP49771 235 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 MYH13Q9UKX3 1938 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 GRM8O00222 908 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 TFRCP02786 760 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 BMP8BP34820 402 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 STXBP5LQ9Y2K9 1186 aa16.29■□□□□ 0.2
CHRNA1-203ENST00000409219 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 CAPN2P17655 700 aa16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 PXYLP1Q8TE99 480 aa16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 MRIQ9BWK5 157 aa16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 DOCK2Q92608 1830 aa16.28■□□□□ 0.2
CHRNA1-203ENST00000409219 MAST3O60307 1309 aa16.27■□□□□ 0.2
CHRNA1-203ENST00000409219 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.19
CHRNA1-203ENST00000409219 FAM151AQ8WW52 585 aa16.27■□□□□ 0.19
CHRNA1-203ENST00000409219 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.19
CHRNA1-203ENST00000409219 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 DDX60LQ5H9U9 1706 aaKnown RBP16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 IRF5Q13568 498 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 C7orf61Q8IZ16 206 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
CHRNA1-203ENST00000409219 PHIPQ8WWQ0 1821 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 TNPO2O14787 897 aaKnown RBP16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 BCAMP50895 628 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 TCP10Q12799 353 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 SUGT1Q9Y2Z0 365 aa16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
CHRNA1-203ENST00000409219 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 CXCL11O14625 94 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 NFIAQ12857 509 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 KAZALD1Q96I82 304 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 ATRNL1Q5VV63 1379 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
CHRNA1-203ENST00000409219 DOCK1Q14185 1865 aa16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 LRRC24Q50LG9 513 aa16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 IL16Q14005 1332 aa16.23■□□□□ 0.19
CHRNA1-203ENST00000409219 SYN1P17600 705 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms