RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 WRNIP1Q96S55 665 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
SNORD88B-201ENST00000408454 MYH13Q9UKX3 1938 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 SPDYE5A6NIY4 337 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 ENTPD3O75355 529 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 GNRH1P01148 92 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 PLCG2P16885 1265 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 NEUROD6Q96NK8 337 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 TMEM39BQ9GZU3 492 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 ELP3Q9H9T3 547 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
SNORD88B-201ENST00000408454 PPATQ06203 517 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 PPIL2Q13356 520 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 VGLL4Q14135 290 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 TEPSINQ96N21 525 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 TBC1D2Q9BYX2 928 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 PICK1Q9NRD5 415 aa15.81■□□□□ 0.12
SNORD88B-201ENST00000408454 SSC5DA1L4H1 1573 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 CCL15-CCL14A0A0B4J2E2 113 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 BAG3O95817 575 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 PRMT2P55345 433 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 CCL15Q16663 113 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 ITPRIPQ8IWB1 547 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 ZSCAN29Q8IWY8 852 aaPredicted RBP15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 FAM163AQ96GL9 167 aaPredicted RBP15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 XAGE2Q96GT9 111 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 USP40Q9NVE5 1235 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 DAGLAQ9Y4D2 1042 aa15.8■□□□□ 0.12
SNORD88B-201ENST00000408454 HMMRO75330 724 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 PHKA1P46020 1223 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 SP3Q02447 781 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 TAF1CQ15572 869 aaPredicted RBP15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 CLUAP1Q96AJ1 413 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 OTUD5Q96G74 571 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 PCDHAC2Q9Y5I4 1007 aa15.79■□□□□ 0.12
SNORD88B-201ENST00000408454 CASP8AP2Q9UKL3 1982 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 LAMB1P07942 1786 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 PRDX5P30044 214 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 TFCP2Q12800 502 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 EFCC1Q9HA90 598 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 LRP2BPQ9P2M1 347 aa15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
SNORD88B-201ENST00000408454 MROH7-TTC4A0A0A0MT08 1334 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 GAKO14976 1311 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 HOXD10P28358 340 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 SPATA5Q8NB90 893 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 HPS5Q9UPZ3 1129 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 TRIM17Q9Y577 477 aa15.77■□□□□ 0.12
SNORD88B-201ENST00000408454 BCAR3O75815 825 aa15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 TIMM10P62072 90 aa15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 NOL9Q5SY16 702 aaKnown RBP15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 TRIM34Q9BYJ4 488 aa15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
SNORD88B-201ENST00000408454 IGF2BP3O00425 579 aaKnown RBP eCLIP15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 CXCL11O14625 94 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 CACNB3P54284 484 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 ATP8B2P98198 1209 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 TCP10Q12799 353 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 CRHR2Q13324 411 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 TMEM57Q8N5G2 664 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 SSH3Q8TE77 659 aa15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 ZNF512BQ96KM6 892 aaPredicted RBP15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
SNORD88B-201ENST00000408454 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 CAPN2P17655 700 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 ANKRD23Q86SG2 305 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 MIER1Q8N108 512 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 SNCAIPQ9Y6H5 919 aa15.74■□□□□ 0.11
SNORD88B-201ENST00000408454 GPR75-ASB3A0A0A6YYF3 556 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 TLR2O60603 784 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 CTNND1O60716 968 aaKnown RBP15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 BTDP43251 543 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 RGS3P49796 1198 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 GRIK5Q16478 980 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms