RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 FPGT-TNNI3KV9GXZ4 949 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 TACC1O75410 805 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 ZFYP08048 801 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CYP21A2P08686 494 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 VAV2P52735 878 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 UBXN1Q04323 297 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CASP8Q14790 479 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 POSTNQ15063 836 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 MUM1L1Q5H9M0 696 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 BEND3Q5T5X7 828 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 SND1Q7KZF4 910 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 VSTM4Q8IW00 320 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 LINC00301Q8NCQ3 95 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 ZNF274Q96GC6 653 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 HELLSQ9NRZ9 838 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 PCDHA5Q9Y5H7 936 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CAPN7Q9Y6W3 813 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 KIF1BO60333 1816 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 E7EWF7 191 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 RNF40O75150 1001 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 POLA2Q14181 598 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 ZNF827Q17R98 1081 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CFAP58Q5T655 872 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CYP26C1Q6V0L0 522 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CACNA2D4Q7Z3S7 1137 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 SCLT1Q96NL6 688 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 L2HGDHQ9H9P8 463 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 TATP17735 454 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-202ENST00000405010 METTL24Q5JXM2 366 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 SLC35F6Q8N357 371 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 CLGNO14967 610 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 PPFIA4O75335 1185 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 HOXB7P09629 217 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 IDEP14735 1019 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 ATP5JP18859 108 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 GNGT1P63211 74 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 IFFO1Q0D2I5 559 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 PPFIA1Q13136 1202 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 KRT40Q6A162 431 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 IL17REQ8NFR9 667 aa8.37□□□□□ -1.07
HDAC9-202ENST00000405010 SYNRGQ9UMZ2 1314 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ANKRD18AQ8IVF6 992 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CDK5RAP3Q96JB5 506 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CLSTN1O94985 981 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 PDIA3P30101 505 aaKnown RBP8.36□□□□□ -1.07
HDAC9-202ENST00000405010 TIMM10P62072 90 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ESCO1Q5FWF5 840 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 WWC2Q6AWC2 1192 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CYB5RLQ6IPT4 315 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 MMS22LQ6ZRQ5 1243 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 TLR7Q9NYK1 1049 aaKnown RBP8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ADCY9O60503 1353 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ABCA6Q8N139 1617 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 A0A1B0GUA9 196 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 MACROD2A1Z1Q3 448 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ARHGAP25P42331 645 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CABP4P57796 275 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
HDAC9-202ENST00000405010 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 ARFGAP2Q8N6H7 521 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC42Q96M95 316 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 SAR1BQ9Y6B6 198 aa8.36□□□□□ -1.07
HDAC9-202ENST00000405010 A6NNZ2 444 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 KCNJ6P48051 423 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 NAA25Q14CX7 972 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 RTN1Q16799 776 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 TUBB8Q3ZCM7 444 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 TADA2BQ86TJ2 420 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 FMR1NBQ8N0W7 255 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 IFT81Q8WYA0 676 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CLIC6Q96NY7 704 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CAPS2Q9BXY5 557 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 RNF17Q9BXT8 1623 aaKnown RBP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 MINDY4BA8MYZ0 360 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC178Q5BJE1 867 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 PHKBQ93100 1093 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 WDR24Q96S15 920 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 RMND1Q9NWS8 449 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CDK12Q9NYV4 1490 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CARMIL3Q8ND23 1372 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 IL15P40933 162 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 EIF4A1P60842 406 aaKnown RBP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 DDX21Q9NR30 783 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC9-202ENST00000405010 SERTAD1Q9UHV2 236 aa8.35□□□□□ -1.07
HDAC9-202ENST00000405010 CEP152O94986 1710 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms