RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ATL3Q6DD88 541 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 BRAPQ7Z569 592 aa8.89□□□□□ -0.99
HDAC9-201ENST00000401921 DHX37Q8IY37 1157 aaKnown RBP8.89□□□□□ -0.99
HDAC9-201ENST00000401921 RFX7Q2KHR2 1363 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 PRKAB2O43741 272 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 DPCR1Q3MIW9 517 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC144BQ3MJ40 725 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 CYB5R4Q7L1T6 521 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 SPATA5Q8NB90 893 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 LPIN2Q92539 896 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 KCNJ14Q9UNX9 436 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 SFPQP23246 707 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC9-201ENST00000401921 WTAPQ15007 396 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 CLIC6Q96NY7 704 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 RTEL1Q9NZ71 1219 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 hCG_1642624A0A1W2PR95 340 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 SMTNL1A8MU46 457 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 PFKFB1P16118 471 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 BRD2P25440 801 aaKnown RBP8.88□□□□□ -0.99
HDAC9-201ENST00000401921 PTPN21Q16825 1174 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 CEP135Q66GS9 1140 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 HOMEZQ8IX15 550 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 MB21D2Q8IYB1 491 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-201ENST00000401921 UTP14AQ9BVJ6 771 aaKnown RBP8.88□□□□□ -0.99
HDAC9-201ENST00000401921 BCL2L12Q9HB09 334 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
HDAC9-201ENST00000401921 ANTXR2P58335 489 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 DDB1Q16531 1140 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 ZNF771Q7L3S4 317 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 IFNL3Q8IZI9 196 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 KIF28PB7ZC32 967 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 PRDM1O75626 825 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 YEATS4O95619 227 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 KCNQ4P56696 695 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 RTN1Q16799 776 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 HOOK1Q9UJC3 728 aaKnown RBP8.87□□□□□ -0.99
HDAC9-201ENST00000401921 JAG2Q9Y219 1238 aa8.87□□□□□ -0.99
HDAC9-201ENST00000401921 CSF1RP07333 972 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 CYP19A1P11511 503 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 TRIM28Q13263 835 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 SNW1Q13573 536 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 KLHL10Q6JEL2 608 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 LRRC8AQ8IWT6 810 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 RASSF8Q8NHQ8 419 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 XPO4Q9C0E2 1151 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 GNL3LQ9NVN8 582 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 AFDNP55196 1824 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 BTBD18B2RXH4 712 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 UBE2Q2LH0YL09 131 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 CDC27P30260 824 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 UBASH3AP57075 661 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 PNOCQ13519 176 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 RASGRF1Q13972 1273 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 SUSD4Q5VX71 490 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 TMEM87BQ96K49 555 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 PATL2C9JE40 543 aaKnown RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 XBP1P17861 261 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 IQCB1Q15051 598 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 UBE3CQ15386 1083 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 PLA2G4DQ86XP0 818 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 FMR1NBQ8N0W7 255 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-201ENST00000401921 WASF1Q92558 559 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC34Q96HJ3 373 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 KRT23Q9C075 422 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 TMX1Q9H3N1 280 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 CPDO75976 1380 aa8.86□□□□□ -0.99
HDAC9-201ENST00000401921 IGSF3O75054 1194 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 GYG1P46976 350 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 AKNAD1Q5T1N1 836 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 DIS3L2Q8IYB7 885 aaKnown RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 STRBPQ96SI9 672 aaKnown RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 SPTLC3Q9NUV7 552 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 ZMYM6O95789 1325 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 NEDD4P46934 1319 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 SH2B2O14492 632 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 NEMFO60524 1076 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CAVIN4Q5BKX8 364 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 TEX2Q8IWB9 1127 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 KIF18AQ8NI77 898 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 SECISBP2LQ93073 1101 aaKnown RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 AGXT2Q9BYV1 514 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms