RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 HSP90B2PQ58FF3 399 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 SYNE3Q6ZMZ3 975 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 A0A1B0GUL7 405 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 KRT32Q14532 448 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 PCDH11XQ9BZA7 1347 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 PCDH11YQ9BZA8 1340 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 TFRCP02786 760 aaKnown RBP19.61■□□□□ 0.73
PTPRA-205ENST00000399903 TOGARAM2Q6ZUX3 1019 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 EXOC4Q96A65 974 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 PACS2Q86VP3 889 aa19.6■□□□□ 0.73
PTPRA-205ENST00000399903 GPTP24298 496 aa19.6■□□□□ 0.73
PTPRA-205ENST00000399903 DNAJC10Q8IXB1 793 aa19.6■□□□□ 0.73
PTPRA-205ENST00000399903 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
PTPRA-205ENST00000399903 BAG1Q99933 345 aaPredicted RBP19.59■□□□□ 0.73
PTPRA-205ENST00000399903 SOS2Q07890 1332 aaPredicted RBP19.59■□□□□ 0.73
PTPRA-205ENST00000399903 FANCLQ9NW38 375 aa19.59■□□□□ 0.73
PTPRA-205ENST00000399903 NLRP12P59046 1061 aa19.59■□□□□ 0.73
PTPRA-205ENST00000399903 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
PTPRA-205ENST00000399903 DEF6Q9H4E7 631 aa19.59■□□□□ 0.73
PTPRA-205ENST00000399903 OVOS2A0A0G2JMS6 1433 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 EIF3CLB5ME19 914 aaKnown RBP19.58■□□□□ 0.73
PTPRA-205ENST00000399903 SPTLC2O15270 562 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 ADAMTS2O95450 1211 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 CTDNEP1O95476 244 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 LRRC24Q50LG9 513 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 EIF3CQ99613 913 aaKnown RBP19.58■□□□□ 0.73
PTPRA-205ENST00000399903 PUS3Q9BZE2 481 aaKnown RBP19.58■□□□□ 0.73
PTPRA-205ENST00000399903 GPHNQ9NQX3 736 aaPredicted RBP19.58■□□□□ 0.73
PTPRA-205ENST00000399903 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 UTYO14607 1347 aa19.58■□□□□ 0.73
PTPRA-205ENST00000399903 A0A0G2JLW4 131 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 CHMP4BP1P59074 171 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 PNOCQ13519 176 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 COL18A1P39060 1754 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 DCCP43146 1447 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 WDHD1O75717 1129 aaPredicted RBP19.58■□□□□ 0.72
PTPRA-205ENST00000399903 HDAC5Q9UQL6 1122 aa19.58■□□□□ 0.72
PTPRA-205ENST00000399903 RFX5P48382 616 aaPredicted RBP19.57■□□□□ 0.72
PTPRA-205ENST00000399903 TNNI3KQ59H18 835 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 ADALQ6DHV7 355 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 FAM89AQ96GI7 184 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 GDAP1L1Q96MZ0 367 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 FPGT-TNNI3KV9GXZ4 949 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 MTF1Q14872 753 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 NCAPHQ15003 741 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 NAA16Q6N069 864 aaPredicted RBP19.57■□□□□ 0.72
PTPRA-205ENST00000399903 OLFM4Q6UX06 510 aa19.57■□□□□ 0.72
PTPRA-205ENST00000399903 CBFA2T2O43439 604 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 KIF4BQ2VIQ3 1234 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 MICALL1Q8N3F8 863 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 KCND1Q9NSA2 647 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 CPDO75976 1380 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 ATP8B1O43520 1251 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 TUBB4AP04350 444 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 IVLP07476 585 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 TXLNAP40222 546 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 STOX1Q6ZVD7 989 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 PIGBQ92521 554 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 C8orf76Q96K31 380 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
PTPRA-205ENST00000399903 RABGGTAQ92696 567 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 CARD10Q9BWT7 1032 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 MRFAP1Q9Y605 127 aa19.56■□□□□ 0.72
PTPRA-205ENST00000399903 PFKFB1P16118 471 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 COL5A2P05997 1499 aaPredicted RBP19.55■□□□□ 0.72
PTPRA-205ENST00000399903 ARHGAP6O43182 974 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 HAND2P61296 217 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 MAP3K9P80192 1104 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 ABCB6Q9NP58 842 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 CWC25Q9NXE8 425 aaPredicted RBP19.55■□□□□ 0.72
PTPRA-205ENST00000399903 SCN11AQ9UI33 1791 aa19.55■□□□□ 0.72
PTPRA-205ENST00000399903 EIF3JO75822 258 aaKnown RBP19.54■□□□□ 0.72
PTPRA-205ENST00000399903 APPP05067 770 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 MYL5Q02045 173 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 SPECC1Q5M775 1068 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
PTPRA-205ENST00000399903 SECISBP2LQ93073 1101 aaKnown RBP19.54■□□□□ 0.72
PTPRA-205ENST00000399903 TUBGCP6Q96RT7 1819 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 CPLX1O14810 134 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 PFKFB2O60825 505 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 SYKP43405 635 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 ATG3Q9NT62 314 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
PTPRA-205ENST00000399903 HDXQ7Z353 690 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 LINC00301Q8NCQ3 95 aa19.54■□□□□ 0.72
PTPRA-205ENST00000399903 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
PTPRA-205ENST00000399903 A0A0U1RQJ8 604 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 FOXO4P98177 505 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 CNNM3Q8NE01 707 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 ATRIPQ8WXE1 791 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 DHX32Q7L7V1 743 aaKnown RBP19.53■□□□□ 0.72
PTPRA-205ENST00000399903 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
PTPRA-205ENST00000399903 GOLIM4O00461 696 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 CASP7P55210 303 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 ZNF569Q5MCW4 686 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 PNKPQ96T60 521 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms