RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 SDCCAG8Q86SQ7 713 aaPredicted RBP15.02■□□□□ -0
LDLRAD4-203ENST00000399848 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
LDLRAD4-203ENST00000399848 RAPGEF3O95398 923 aa15.02■□□□□ -0
LDLRAD4-203ENST00000399848 DCAF17Q5H9S7 520 aaPredicted RBP15.02■□□□□ -0
LDLRAD4-203ENST00000399848 HAUS2Q9NVX0 235 aa15.02■□□□□ -0
LDLRAD4-203ENST00000399848 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
LDLRAD4-203ENST00000399848 PHLDB2Q86SQ0 1253 aa15.02■□□□□ -0
LDLRAD4-203ENST00000399848 GPHNQ9NQX3 736 aaPredicted RBP15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 SLC9C2Q5TAH2 1124 aa15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 OTUD7BQ6GQQ9 843 aa15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 SYT10Q6XYQ8 523 aa15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 CD109Q6YHK3 1445 aa15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 SETDB2Q96T68 719 aa15.02□□□□□ -0.01
LDLRAD4-203ENST00000399848 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 TERF1P54274 439 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 RAB3GAP1Q15042 981 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 GKAP1Q5VSY0 366 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 ARHGAP25P42331 645 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 ITIH3Q06033 890 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 CNNM4Q6P4Q7 775 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 CYP26C1Q6V0L0 522 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 ERO1AQ96HE7 468 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 MYL5Q02045 173 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 SH2D4BQ5SQS7 431 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 SEPT14Q6ZU15 432 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 GBP7Q8N8V2 638 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 LEO1Q8WVC0 666 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 SATB1Q01826 763 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 C8orf74Q6P047 294 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 NAPGQ99747 312 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 HPDP32754 393 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 UAP1Q16222 522 aaPredicted RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 EVCP57679 992 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 PLS1Q14651 629 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 KMT5BQ4FZB7 885 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 RUFY4Q6ZNE9 571 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 NYXQ9GZU5 481 aa15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 TTF2Q9UNY4 1162 aaKnown RBP15.01□□□□□ -0.01
LDLRAD4-203ENST00000399848 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 NDUFAB1O14561 156 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 IGHDP01880 384 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SRGAP1Q7Z6B7 1085 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 MCUR1Q96AQ8 359 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 HAUS7Q99871 368 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 PLCB1Q9NQ66 1216 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 FANCAO15360 1455 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SMTNP53814 917 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 RUFY3Q7L099 469 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 TOPBP1Q92547 1522 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SPOPO43791 374 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SETSIPP0DME0 302 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SV2BQ7L1I2 683 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 KRT5P13647 590 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 PLCD1P51178 756 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 MAP7Q14244 749 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 ADGRL1O94910 1474 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 EP400NLQ6ZTU2 488 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 SKAP1Q86WV1 359 aa15□□□□□ -0.01
LDLRAD4-203ENST00000399848 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 MAP3K1Q13233 1512 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 TTC36A6NLP5 189 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 STK24Q9Y6E0 443 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 RILPL1Q5EBL4 403 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 CETN3O15182 167 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 DHX32Q7L7V1 743 aaKnown RBP14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 PRPF31Q8WWY3 499 aaKnown RBP14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 I3L4J1 428 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 GTF3C6Q969F1 213 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 NUP58Q9BVL2 599 aa14.99□□□□□ -0.01
LDLRAD4-203ENST00000399848 INPP5BP32019 993 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 FOXO3O43524 673 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 RASSF2P50749 326 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 FNBP1Q96RU3 617 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 CCT6AP40227 531 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 TRPC3Q13507 836 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 NOX5Q96PH1 765 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 STX17P56962 302 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 NOC4LQ9BVI4 516 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 RASA3Q14644 834 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 RAB3IPQ96QF0 476 aaPredicted RBP14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 PICK1Q9NRD5 415 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 FAM114A2Q9NRY5 505 aa14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 ARHGEF2Q92974 986 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-203ENST00000399848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms