RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
CACNA1C-217ENST00000399641 ZBED4O75132 1171 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 RHOXF2BP0C7M4 288 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 RBBP5Q15291 538 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 DBN1Q16643 649 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 RHOXF2Q9BQY4 288 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 TTC12Q9H892 705 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ALDH3A1P30838 453 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ITIH3Q06033 890 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 CAPN2P17655 700 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 SLC8A3P57103 927 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 DLGAP5Q15398 846 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 ACEP12821 1306 aa12.47□□□□□ -0.41
CACNA1C-217ENST00000399641 KIAA1524Q8TCG1 905 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 BRD4O60885 1362 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 TRAPPC10P48553 1259 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 RNF168Q8IYW5 571 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 PALM3A6NDB9 673 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 TTC14Q96N46 770 aa12.46□□□□□ -0.41
CACNA1C-217ENST00000399641 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.42
CACNA1C-217ENST00000399641 BSPRYQ5W0U4 402 aa12.46□□□□□ -0.42
CACNA1C-217ENST00000399641 TTC30AQ86WT1 665 aa12.46□□□□□ -0.42
CACNA1C-217ENST00000399641 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.42
CACNA1C-217ENST00000399641 RRAGBQ5VZM2 374 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 LRRC27Q9C0I9 530 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 DAPK1P53355 1430 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 C8orf76Q96K31 380 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 SESN3P58005 492 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 IFI16Q16666 785 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 DDX12PQ92771 950 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 PLEKHA4Q9H4M7 779 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 FGD6Q6ZV73 1430 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 AKR1B10O60218 316 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 STMN4Q9H169 189 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 AS3MTQ9HBK9 375 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 SLC12A1Q13621 1099 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 CLUL1Q15846 466 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 ATP6V0A2Q9Y487 856 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
CACNA1C-217ENST00000399641 BAG2O95816 211 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 ABL1P00519 1130 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MYCLP12524 364 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MCUR1Q96AQ8 359 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 HVCN1Q96D96 273 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 CETN3O15182 167 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 SSFA2P28290 1259 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 IDI1Q13907 227 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MAST3O60307 1309 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 APOEP02649 317 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 NAPAP54920 295 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 NR1H4Q96RI1 486 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 ESPNB1AK53 854 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 FYB2Q5VWT5 728 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 ERCC6LQ2NKX8 1250 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 PLIN2Q99541 437 aa12.44□□□□□ -0.42
CACNA1C-217ENST00000399641 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
CACNA1C-217ENST00000399641 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms