RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ZBTB38Q8NAP3 1195 aaPredicted RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 TGFBRAP1Q8WUH2 860 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 PA2G4Q9UQ80 394 aaKnown RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 GSTTP1A0A1W2PQM5 241 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 LRFN2Q9ULH4 789 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 BICDL2A1A5D9 508 aa9□□□□□ -0.97
USP47-203ENST00000399455 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
USP47-203ENST00000399455 SPC24Q8NBT2 197 aa9□□□□□ -0.97
USP47-203ENST00000399455 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
USP47-203ENST00000399455 MAP7D2Q96T17 732 aa9□□□□□ -0.97
USP47-203ENST00000399455 MRPL11Q9Y3B7 192 aaKnown RBP9□□□□□ -0.97
USP47-203ENST00000399455 ZSCAN12O43309 604 aa9□□□□□ -0.97
USP47-203ENST00000399455 TAF5LO75529 589 aa9□□□□□ -0.97
USP47-203ENST00000399455 ADCY7P51828 1080 aa9□□□□□ -0.97
USP47-203ENST00000399455 ASIC1P78348 528 aa9□□□□□ -0.97
USP47-203ENST00000399455 TRPC3Q13507 836 aa9□□□□□ -0.97
USP47-203ENST00000399455 TNNI3KQ59H18 835 aa9□□□□□ -0.97
USP47-203ENST00000399455 ARMT1Q9H993 441 aa9□□□□□ -0.97
USP47-203ENST00000399455 SWAP70Q9UH65 585 aa9□□□□□ -0.97
USP47-203ENST00000399455 FPGT-TNNI3KV9GXZ4 949 aa9□□□□□ -0.97
USP47-203ENST00000399455 Q6ZUG5 572 aa9□□□□□ -0.97
USP47-203ENST00000399455 KCNG4Q8TDN1 519 aa9□□□□□ -0.97
USP47-203ENST00000399455 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
USP47-203ENST00000399455 RPL13P26373 211 aaKnown RBP9□□□□□ -0.97
USP47-203ENST00000399455 FAM160B1Q5W0V3 765 aa9□□□□□ -0.97
USP47-203ENST00000399455 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
USP47-203ENST00000399455 CPXCR1Q8N123 301 aa9□□□□□ -0.97
USP47-203ENST00000399455 RBM8AQ9Y5S9 174 aaKnown RBP9□□□□□ -0.97
USP47-203ENST00000399455 GCOM1H8Y6P7 765 aaPredicted RBP9□□□□□ -0.97
USP47-203ENST00000399455 MYZAPP0CAP1 466 aa9□□□□□ -0.97
USP47-203ENST00000399455 MCM3P25205 808 aa9□□□□□ -0.97
USP47-203ENST00000399455 NSMFQ6X4W1 530 aa9□□□□□ -0.97
USP47-203ENST00000399455 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
USP47-203ENST00000399455 RAB11FIP4Q86YS3 637 aa9□□□□□ -0.97
USP47-203ENST00000399455 OTUD6BQ8N6M0 293 aa9□□□□□ -0.97
USP47-203ENST00000399455 CTAGE1Q96RT6 745 aa9□□□□□ -0.97
USP47-203ENST00000399455 MYO3BQ8WXR4 1341 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TRIM75PA6NK02 468 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 SEMA3EO15041 775 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TOP1P11387 765 aaKnown RBP8.99□□□□□ -0.97
USP47-203ENST00000399455 FERP16591 822 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 AXDND1Q5T1B0 1012 aaPredicted RBP8.99□□□□□ -0.97
USP47-203ENST00000399455 BRINP3Q76B58 766 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TAX1BP1Q86VP1 789 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TMEM87BQ96K49 555 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 P4HA1P13674 534 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 ANKRD35Q8N283 1001 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 DDX19AQ9NUU7 478 aaKnown RBP8.99□□□□□ -0.97
USP47-203ENST00000399455 ADRA2BP18089 450 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 CERKLQ49MI3 558 aaPredicted RBP8.99□□□□□ -0.97
USP47-203ENST00000399455 MAPKAPK5Q8IW41 473 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 RNF34Q969K3 372 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TMEM106CQ9BVX2 250 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 KIF5CO60282 957 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 STX1AQ16623 288 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 CLTCQ00610 1675 aaKnown RBP8.99□□□□□ -0.97
USP47-203ENST00000399455 CCDC169A6NNP5 214 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 KIFAP3Q92845 792 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 PSMD1Q99460 953 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 ADCY10Q96PN6 1610 aa8.99□□□□□ -0.97
USP47-203ENST00000399455 ZNF804BA4D1E1 1349 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 CALUO43852 315 aaPredicted RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 ARID5AQ03989 594 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 BMP2KLQ5H9B9 411 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 ODR4Q5SWX8 454 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 FERMT3Q86UX7 667 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 LGR6Q9HBX8 967 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 ABCC3O15438 1527 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 KDRP35968 1356 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 RNF181Q9P0P0 153 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 PALLDQ8WX93 1383 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 PSMA7O14818 248 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 HDAC1Q13547 482 aaPredicted RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 PPP2R5BQ15173 497 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 ATF7P17544 494 aaPredicted RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 SDSP20132 328 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 TMOD1P28289 359 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 CCT6AP40227 531 aaKnown RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 PPP1R2P41236 205 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 NUCB1Q02818 461 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 CAMK4Q16566 473 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 USH1GQ495M9 461 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 TTLL7Q6ZT98 887 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 BRF1Q92994 677 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 ADGRL3Q9HAR2 1447 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 GOLGA6L7A0A1B0GV03 622 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 EIF3JO75822 258 aaKnown RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 FMNL1O95466 1100 aaPredicted RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 MCM7P33993 719 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 APOBEC3FQ8IUX4 373 aaKnown RBP8.98□□□□□ -0.97
USP47-203ENST00000399455 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 APPBP2Q92624 585 aa8.98□□□□□ -0.97
USP47-203ENST00000399455 GLG1Q92896 1179 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms