RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 PPP4CP60510 307 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 CREB3L3Q68CJ9 461 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
TNRC18-202ENST00000399434 PCDHAC2Q9Y5I4 1007 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
TNRC18-202ENST00000399434 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
TNRC18-202ENST00000399434 UTRNP46939 3433 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 ZMYM6O95789 1325 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 LDHCP07864 332 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 RHBDL3P58872 404 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 CIAPIN1Q6FI81 312 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
TNRC18-202ENST00000399434 SDR42E1Q8WUS8 393 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 SLC4A4Q9Y6R1 1079 aa19.4■□□□□ 0.7
TNRC18-202ENST00000399434 MYH1P12882 1939 aa19.39■□□□□ 0.69
TNRC18-202ENST00000399434 FGAP02671 866 aa19.39■□□□□ 0.69
TNRC18-202ENST00000399434 CRKP46108 304 aa19.39■□□□□ 0.69
TNRC18-202ENST00000399434 HHIPL2Q6UWX4 724 aa19.39■□□□□ 0.69
TNRC18-202ENST00000399434 RPAP1Q9BWH6 1393 aaPredicted RBP19.38■□□□□ 0.69
TNRC18-202ENST00000399434 PATL2C9JE40 543 aaKnown RBP19.38■□□□□ 0.69
TNRC18-202ENST00000399434 CYP21A2P08686 494 aa19.38■□□□□ 0.69
TNRC18-202ENST00000399434 GNAT2P19087 354 aa19.38■□□□□ 0.69
TNRC18-202ENST00000399434 MCCP23508 829 aa19.38■□□□□ 0.69
TNRC18-202ENST00000399434 HDLBPQ00341 1268 aaKnown RBP19.38■□□□□ 0.69
TNRC18-202ENST00000399434 COL9A3Q14050 684 aaPredicted RBP19.38■□□□□ 0.69
TNRC18-202ENST00000399434 ALX1Q15699 326 aa19.38■□□□□ 0.69
TNRC18-202ENST00000399434 APOBEC3HQ6NTF7 200 aaKnown RBP19.38■□□□□ 0.69
TNRC18-202ENST00000399434 NBPF3Q9H094 633 aa19.38■□□□□ 0.69
TNRC18-202ENST00000399434 ANAPC15P60006 121 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 SLF2Q8IX21 1173 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 IFNL3Q8IZI9 196 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 AGBL3Q8NEM8 1001 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 ZDHHC15Q96MV8 337 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 MRIQ9BWK5 157 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 SIPA1L1O43166 1804 aa19.37■□□□□ 0.69
TNRC18-202ENST00000399434 SHTN1A0MZ66 631 aa19.36■□□□□ 0.69
TNRC18-202ENST00000399434 STOX1Q6ZVD7 989 aa19.36■□□□□ 0.69
TNRC18-202ENST00000399434 MKRN1Q9UHC7 482 aaKnown RBP19.36■□□□□ 0.69
TNRC18-202ENST00000399434 SERPINA10Q9UK55 444 aa19.36■□□□□ 0.69
TNRC18-202ENST00000399434 ADCK5Q3MIX3 580 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
TNRC18-202ENST00000399434 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
TNRC18-202ENST00000399434 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 BAG3O95817 575 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 APPP05067 770 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
TNRC18-202ENST00000399434 HAND2P61296 217 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 EVX2Q03828 476 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 TNIP1Q15025 636 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 GPR162Q16538 588 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
TNRC18-202ENST00000399434 TSGA10IPQ3SY00 556 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 CFAP100Q494V2 611 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 C9orf131Q5VYM1 1079 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 CDC42EP5Q6NZY7 148 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 TBC1D10CQ8IV04 446 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 TEX11Q8IYF3 940 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 NOL10Q9BSC4 688 aaKnown RBP19.34■□□□□ 0.69
TNRC18-202ENST00000399434 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
TNRC18-202ENST00000399434 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.68
TNRC18-202ENST00000399434 GMPSP49915 693 aaPredicted RBP19.33■□□□□ 0.68
TNRC18-202ENST00000399434 GIMAP6Q6P9H5 292 aa19.33■□□□□ 0.68
TNRC18-202ENST00000399434 CERS3Q8IU89 383 aa19.33■□□□□ 0.68
TNRC18-202ENST00000399434 ZBED3Q96IU2 234 aaPredicted RBP19.33■□□□□ 0.68
TNRC18-202ENST00000399434 NAPBQ9H115 298 aa19.33■□□□□ 0.68
TNRC18-202ENST00000399434 CTNNA3Q9UI47 895 aa19.33■□□□□ 0.68
TNRC18-202ENST00000399434 FLT1P17948 1338 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 CYP2D7A0A087X1C5 515 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 USP17L8P0C7I0 530 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 PLCG2P16885 1265 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 RPS12P25398 132 aaKnown RBP19.32■□□□□ 0.68
TNRC18-202ENST00000399434 TDO2P48775 406 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 ZNF280AP59817 542 aaPredicted RBP19.32■□□□□ 0.68
TNRC18-202ENST00000399434 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 TGFBRAP1Q8WUH2 860 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 DDX4Q9NQI0 724 aaKnown RBP19.32■□□□□ 0.68
TNRC18-202ENST00000399434 ATP8A2Q9NTI2 1148 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 GJA3Q9Y6H8 435 aa19.32■□□□□ 0.68
TNRC18-202ENST00000399434 CD2BP2O95400 341 aaKnown RBP19.31■□□□□ 0.68
TNRC18-202ENST00000399434 CYP2D6P10635 497 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 RABEP1Q15276 862 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 MAPKAPK5Q8IW41 473 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 PRMT6Q96LA8 375 aaPredicted RBP19.31■□□□□ 0.68
TNRC18-202ENST00000399434 NACAP1Q9BZK3 213 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
TNRC18-202ENST00000399434 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 EGFRP00533 1210 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 CPA1P15085 419 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
TNRC18-202ENST00000399434 CTR9Q6PD62 1173 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 MTMR14Q8NCE2 650 aa19.3■□□□□ 0.68
TNRC18-202ENST00000399434 JAKMIP1Q96N16 626 aaKnown RBP19.3■□□□□ 0.68
TNRC18-202ENST00000399434 UPF3BQ9BZI7 483 aaKnown RBP19.3■□□□□ 0.68
TNRC18-202ENST00000399434 E7EWF7 191 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
TNRC18-202ENST00000399434 USP5P45974 858 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms