RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RTCBQ9Y3I0 505 aaKnown RBP20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 MYO5AQ9Y4I1 1855 aaKnown RBP20.66■□□□□ 0.9
HLA-DQB1-204ENST00000399084 NHSQ6T4R5 1651 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 RPS8P62241 208 aaKnown RBP20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ADALQ6DHV7 355 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SASS6Q6UVJ0 657 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 CYB5R4Q7L1T6 521 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 SLC4A4Q9Y6R1 1079 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 THSD7AQ9UPZ6 1657 aa20.65■□□□□ 0.9
HLA-DQB1-204ENST00000399084 CCDC196A0A1B0GTZ2 297 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 B4E1Z4 1266 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TYRO3Q06418 890 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 USP28Q96RU2 1077 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 ARMT1Q9H993 441 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 EPB41L4AQ9HCS5 686 aaPredicted RBP20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 USP25Q9UHP3 1055 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 USP21Q9UK80 565 aa20.64■□□□□ 0.9
HLA-DQB1-204ENST00000399084 TDO2P48775 406 aa20.64■□□□□ 0.89
HLA-DQB1-204ENST00000399084 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.89
HLA-DQB1-204ENST00000399084 VPS37DQ86XT2 251 aa20.64■□□□□ 0.89
HLA-DQB1-204ENST00000399084 LY9Q9HBG7 655 aa20.64■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ERICH2A1L162 156 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CYP7A1P22680 504 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 FAM160A1Q05DH4 1040 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 TBC1D9BQ66K14 1250 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ZSWIM5Q9P217 1185 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 SLC12A7Q9Y666 1083 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
HLA-DQB1-204ENST00000399084 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CCDC69A6NI79 296 aa20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 IFIT3O14879 490 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 NR1I2O75469 434 aa20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 PTMAP06454 111 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 NBPF5PQ86XG9 351 aaPredicted RBP20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CCAR1Q8IX12 1150 aaKnown RBP20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 BRIP1Q9BX63 1249 aa20.62■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ADCY5O95622 1261 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 LINC00301Q8NCQ3 95 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CCNL1Q9UK58 526 aaPredicted RBP20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 MRVI1Q9Y6F6 885 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 NEDD4P46934 1319 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 SNAP23O00161 211 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ONECUT3O60422 494 aaPredicted RBP20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 KINO60870 393 aaKnown RBP20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 C4BP0C0L5 1744 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ADRA2BP18089 450 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ME1P48163 572 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 TRIM29Q14134 588 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 MYSM1Q5VVJ2 828 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 RAI14Q9P0K7 980 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 A0A1B0GUL6 1792 aa20.61■□□□□ 0.89
HLA-DQB1-204ENST00000399084 BTAF1O14981 1849 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 GOLGA6L6A8MZA4 724 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 IFNAR1P17181 557 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ENGASEQ8NFI3 743 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ALG1Q9BT22 464 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CHD4Q14839 1912 aa20.6■□□□□ 0.89
HLA-DQB1-204ENST00000399084 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 GNPATO15228 680 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 KIF23Q02241 960 aaPredicted RBP20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 SF3A1Q15459 793 aaKnown RBP20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 NTRK3Q16288 839 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 CAMK4Q16566 473 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 JMYQ8N9B5 988 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 MRPS27Q92552 414 aaKnown RBP20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 ESR2Q92731 530 aa20.59■□□□□ 0.89
HLA-DQB1-204ENST00000399084 TERF1P54274 439 aa20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 PPARAQ07869 468 aa20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 SSRP1Q08945 709 aaKnown RBP20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 STK38Q15208 465 aa20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 TPRNQ4KMQ1 711 aa20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.58■□□□□ 0.89
HLA-DQB1-204ENST00000399084 SPTLC2O15270 562 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FGRP09769 529 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 HIBADHP31937 336 aaKnown RBP20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 GYG1P46976 350 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 WTAPQ15007 396 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TRIM22Q8IYM9 498 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 RIOK1Q9BRS2 568 aaKnown RBP20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ABCF2Q9UG63 623 aa20.58■□□□□ 0.88
HLA-DQB1-204ENST00000399084 OFD1O75665 1012 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FMNL1O95466 1100 aaPredicted RBP20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 U2AF2P26368 475 aaKnown RBP eCLIP20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 GUCY1B3Q02153 619 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CTDSPL2Q05D32 466 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SNW1Q13573 536 aaKnown RBP20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ANO1Q5XXA6 986 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CELF1Q92879 486 aaKnown RBP20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 PCDHA7Q9UN72 937 aa20.57■□□□□ 0.88
HLA-DQB1-204ENST00000399084 LY75O60449 1722 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms