RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CACNA2D4Q7Z3S7 1137 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 KRT26Q7Z3Y9 468 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MPNDQ8N594 471 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 KCNG4Q8TDN1 519 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SMCR8Q8TEV9 937 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MYCBPQ99417 103 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MMRN2Q9H8L6 949 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 OLFML3Q9NRN5 406 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 GON4LQ3T8J9 2241 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 N4BP1O75113 896 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 BRAPQ7Z569 592 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SELENOOQ9BVL4 669 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 TNMDQ9H2S6 317 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 DENND2AQ9ULE3 1009 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 LAMB1P07942 1786 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 XRN1Q8IZH2 1706 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MROH5Q6ZUA9 1318 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ILF2Q12905 390 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MTA1Q13330 715 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 DRP2Q13474 957 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SMC1BQ8NDV3 1235 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 C16orf45Q96MC5 204 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 ANAPC4Q9UJX5 808 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 FAN1Q9Y2M0 1017 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 NOS1P29475 1434 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SRGAP3O43295 1099 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CA4P22748 312 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ATP6V1E1P36543 226 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SAMD1Q6SPF0 538 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 SND1Q7KZF4 910 aaKnown RBP eCLIP3.07□□□□□ -1.92
CHD9-202ENST00000398510 HS2ST1Q7LGA3 356 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ANKRD24Q8TF21 1146 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 RUNDC3BQ96NL0 473 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 NUP85Q9BW27 656 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MAD1L1Q9Y6D9 718 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MRVI1Q9Y6F6 885 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ATP6V1AP38606 617 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CDC42EP1Q00587 391 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ALCAMQ13740 583 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 PDZD4Q76G19 769 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 AACSQ86V21 672 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ZNF526Q8TF50 670 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MAGEF1Q9HAY2 307 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 LRRFIP2Q9Y608 721 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 DDX60LQ5H9U9 1706 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 ERVK-7P63135 1459 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8TH3BQL2 631 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8HP0CJ92 632 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SSRP1Q08945 709 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 TRIM14Q14142 442 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CRACR2AQ9BSW2 395 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MBIPQ9NS73 344 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ANO10Q9NW15 660 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 PHF8Q9UPP1 1060 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SLIT1O75093 1534 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 PRKAR2BP31323 418 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MCM5P33992 734 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 ARID5AQ03989 594 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 KIAA0753Q2KHM9 967 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CCDC89Q8N998 374 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 NCOA7Q8NI08 942 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 WDR66Q8TBY9 1149 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 NUDT16Q96DE0 195 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 HAUS8Q9BT25 410 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 TRMT112Q9UI30 125 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 ERBB4Q15303 1308 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 LAMB4A4D0S4 1761 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 GSTTP1A0A1W2PQM5 241 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 SFPQP23246 707 aaKnown RBP eCLIP3.07□□□□□ -1.92
CHD9-202ENST00000398510 TTC39CQ8N584 583 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 IFT74Q96LB3 600 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CCDC113Q9H0I3 377 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 NT5C3AQ9H0P0 336 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 DDX19AQ9NUU7 478 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 MROH7-TTC4A0A0A0MT08 1334 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MROH7Q68CQ1 1323 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 FKBP4Q02790 459 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-202ENST00000398510 STRN3Q13033 797 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 HIRIP3Q9BW71 556 aaPredicted RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 IQCA1LA6NCM1 817 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 THAP12O43422 761 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 OTUD6AQ7L8S5 288 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 KDM2BQ8NHM5 1336 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 NLRP5P59047 1200 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 TUBB2AQ13885 445 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 MAP3K21Q5TCX8 1036 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 LIN9Q5TKA1 542 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 TTC6Q86TZ1 520 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 UBL4BQ8N7F7 174 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 CDHR1Q96JP9 859 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 TUBB2BQ9BVA1 445 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SRRTQ9BXP5 876 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 ZC3H12CQ9C0D7 883 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 EVA1BQ9NVM1 165 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 G3BP2Q9UN86 482 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 APOBRQ0VD83 1088 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 SMARCC2Q8TAQ2 1214 aa3.06□□□□□ -1.92
CHD9-202ENST00000398510 ZCRB1Q8TBF4 217 aaKnown RBP3.06□□□□□ -1.92
CHD9-202ENST00000398510 COL14A1Q05707 1796 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms