RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DEFB129Q9H1M3 183 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 USP40Q9NVE5 1235 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 MYO1BO43795 1136 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 PDE4AP27815 886 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 RHBDL3P58872 404 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 RASA3Q14644 834 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 NAA16Q6N069 864 aaPredicted RBP19.2■□□□□ 0.66
MBD1-207ENST00000398488 APOBEC3FQ8IUX4 373 aaKnown RBP19.2■□□□□ 0.66
MBD1-207ENST00000398488 ZFPM1Q8IX07 1006 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 STAP2Q9UGK3 403 aa19.2■□□□□ 0.66
MBD1-207ENST00000398488 MAST2Q6P0Q8 1798 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 PDE1AP54750 535 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 TTC41PQ6P2S7 1318 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 MAGEB6Q8N7X4 407 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 FZD1Q9UP38 647 aa19.19■□□□□ 0.66
MBD1-207ENST00000398488 SSC5DA1L4H1 1573 aa19.18■□□□□ 0.66
MBD1-207ENST00000398488 CYP7A1P22680 504 aa19.18■□□□□ 0.66
MBD1-207ENST00000398488 DYNLL1P63167 89 aaKnown RBP19.18■□□□□ 0.66
MBD1-207ENST00000398488 MOB2Q70IA6 237 aa19.18■□□□□ 0.66
MBD1-207ENST00000398488 FAM198AQ9UFP1 575 aa19.18■□□□□ 0.66
MBD1-207ENST00000398488 TCRBV5S4A2TA0A5A2 114 aa19.17■□□□□ 0.66
MBD1-207ENST00000398488 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
MBD1-207ENST00000398488 WDHD1O75717 1129 aaPredicted RBP19.17■□□□□ 0.66
MBD1-207ENST00000398488 PDE6AP16499 860 aa19.17■□□□□ 0.66
MBD1-207ENST00000398488 GSTO1P78417 241 aa19.17■□□□□ 0.66
MBD1-207ENST00000398488 NBPF12Q5TAG4 269 aaPredicted RBP19.17■□□□□ 0.66
MBD1-207ENST00000398488 PLEKHM2Q8IWE5 1019 aa19.17■□□□□ 0.66
MBD1-207ENST00000398488 DDX4Q9NQI0 724 aaKnown RBP19.17■□□□□ 0.66
MBD1-207ENST00000398488 RFX7Q2KHR2 1363 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 LDHCP07864 332 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 TTF1Q15361 905 aaPredicted RBP19.16■□□□□ 0.66
MBD1-207ENST00000398488 SKAP1Q86WV1 359 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 SH3RF3Q8TEJ3 882 aaPredicted RBP19.16■□□□□ 0.66
MBD1-207ENST00000398488 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
MBD1-207ENST00000398488 AATFQ9NY61 560 aaKnown RBP eCLIP19.16■□□□□ 0.66
MBD1-207ENST00000398488 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
MBD1-207ENST00000398488 TCP10Q12799 353 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 MAP3K12Q12852 859 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 SLC9C2Q5TAH2 1124 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 CREBZFQ9NS37 354 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 CEP350Q5VT06 3117 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 ZNF532Q9HCE3 1301 aa19.15■□□□□ 0.66
MBD1-207ENST00000398488 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
MBD1-207ENST00000398488 SLURP2P0DP57 97 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 ADD2P35612 726 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 RGS3P49796 1198 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 PPP4CP60510 307 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 PRKG1Q13976 671 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 FKBP1CQ5VVH2 108 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 SH3BP5LQ7L8J4 393 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 IDI2Q9BXS1 227 aa19.14■□□□□ 0.65
MBD1-207ENST00000398488 ERC2O15083 957 aa19.13■□□□□ 0.65
MBD1-207ENST00000398488 NEFLP07196 543 aa19.13■□□□□ 0.65
MBD1-207ENST00000398488 FAM83AQ86UY5 434 aa19.13■□□□□ 0.65
MBD1-207ENST00000398488 DNAJC5GQ8N7S2 189 aa19.13■□□□□ 0.65
MBD1-207ENST00000398488 RIOK1Q9BRS2 568 aaKnown RBP19.13■□□□□ 0.65
MBD1-207ENST00000398488 GBA2Q9HCG7 927 aaPredicted RBP19.13■□□□□ 0.65
MBD1-207ENST00000398488 TMOD2Q9NZR1 351 aa19.13■□□□□ 0.65
MBD1-207ENST00000398488 PICALMQ13492 652 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 TNFAIP1Q13829 316 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 SAPCD2Q86UD0 394 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 KBTBD3Q8NAB2 608 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 FAM151AQ8WW52 585 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 PPP2R3BQ9Y5P8 575 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 TLL2Q9Y6L7 1015 aa19.12■□□□□ 0.65
MBD1-207ENST00000398488 UBE2Q2LH0YL09 131 aa19.11■□□□□ 0.65
MBD1-207ENST00000398488 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
MBD1-207ENST00000398488 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
MBD1-207ENST00000398488 MKRN1Q9UHC7 482 aaKnown RBP19.11■□□□□ 0.65
MBD1-207ENST00000398488 ABT1Q9ULW3 272 aaKnown RBP19.11■□□□□ 0.65
MBD1-207ENST00000398488 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
MBD1-207ENST00000398488 IGSF3O75054 1194 aa19.1■□□□□ 0.65
MBD1-207ENST00000398488 TNNI2P48788 182 aa19.1■□□□□ 0.65
MBD1-207ENST00000398488 CDK5RAP2Q96SN8 1893 aa19.1■□□□□ 0.65
MBD1-207ENST00000398488 LCORLQ8N3X6 602 aa19.1■□□□□ 0.65
MBD1-207ENST00000398488 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
MBD1-207ENST00000398488 MYH7P12883 1935 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 ENTPD3O75355 529 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 USP2O75604 605 aaPredicted RBP19.09■□□□□ 0.65
MBD1-207ENST00000398488 BAG3O95817 575 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 UBE3CQ15386 1083 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 MAPKAPK5Q8IW41 473 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 C2orf69Q8N8R5 385 aa19.09■□□□□ 0.65
MBD1-207ENST00000398488 PUS7LQ9H0K6 701 aaKnown RBP19.09■□□□□ 0.65
MBD1-207ENST00000398488 PAPPA2Q9BXP8 1791 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 MAGEB6P1A0A0J9YX57 407 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 RASSF10A6NK89 507 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 HUNKP57058 714 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 CENPQQ7L2Z9 268 aaPredicted RBP19.08■□□□□ 0.64
MBD1-207ENST00000398488 MIGA2Q7L4E1 593 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 OSBP2Q969R2 916 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.08■□□□□ 0.647e-7■■■■□ 23.2
MBD1-207ENST00000398488 ARMT1Q9H993 441 aa19.08■□□□□ 0.64
MBD1-207ENST00000398488 ATRNL1Q5VV63 1379 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms