RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 STAT6P42226 847 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 EVCP57679 992 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 ARID5AQ03989 594 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 ESR2Q92731 530 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 RAB34Q9BZG1 259 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 B4E1Z4 1266 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 MYL5Q02045 173 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF287Q9HBT7 754 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 UQCRFS1P1P0C7P4 283 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 KIF5BP33176 963 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 CALML4Q96GE6 196 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 CARD6Q9BX69 1037 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-204ENST00000397545 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
CCDC40-204ENST00000397545 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 A0A1B0GUL7 405 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ZPR1O75312 459 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 MCM3P25205 808 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
CCDC40-204ENST00000397545 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 IL25Q9H293 177 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 CCT6AP40227 531 aaKnown RBP12.24□□□□□ -0.45
CCDC40-204ENST00000397545 TNNI3KQ59H18 835 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 KRT23Q9C075 422 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 OGFRQ9NZT2 677 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 VPS18Q9P253 973 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 FPGT-TNNI3KV9GXZ4 949 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ERBB3P21860 1342 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 DDIT3P35638 169 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 PDE4BQ07343 736 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 GPIHBP1Q8IV16 184 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-204ENST00000397545 ALS2CR12Q96Q35 445 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 XRN1Q8IZH2 1706 aaKnown RBP12.24□□□□□ -0.45
CCDC40-204ENST00000397545 PXDNQ92626 1479 aa12.24□□□□□ -0.45
CCDC40-204ENST00000397545 CTAGE9A4FU28 777 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 PPP1R12BO60237 982 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 HOXB7P09629 217 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 VPS36Q86VN1 386 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 MAGEB6Q8N7X4 407 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 GOLGA1Q92805 767 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 BAG1Q99933 345 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 ADCY9O60503 1353 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 FGFR1OPO95684 399 aaKnown RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 ASIC1P78348 528 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 PHKBQ93100 1093 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 EXOC1Q9NV70 894 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 NR1I2O75469 434 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 GPATCH11Q8N954 259 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 EAF2Q96CJ1 260 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-204ENST00000397545 FEZ1Q99689 392 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 MTMR6Q9Y217 621 aa12.23□□□□□ -0.45
CCDC40-204ENST00000397545 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 MCM7P33993 719 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 FANCCQ00597 558 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 ANO1Q5XXA6 986 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 BRAPQ7Z569 592 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 A0A087WWV3 80 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 CYLC1P35663 651 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-204ENST00000397545 MAP2K1Q02750 393 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-204ENST00000397545 PPARDQ03181 441 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 STAMQ92783 540 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 TPCN1Q9ULQ1 816 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC40-204ENST00000397545 A0A0D9SFI3 127 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 VWA3AA6NCI4 1184 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 PSMA7O14818 248 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 AMPD3Q01432 767 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 SPAG1Q07617 926 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 ZNF174Q15697 407 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
CCDC40-204ENST00000397545 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-204ENST00000397545 SPAG5Q96R06 1193 aa12.22□□□□□ -0.45
CCDC40-204ENST00000397545 VPS16Q9H269 839 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms