RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
PPM1F-202ENST00000397495 ARMT1Q9H993 441 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 KCNQ5Q9NR82 932 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
PPM1F-202ENST00000397495 CPA1P15085 419 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 PODNQ7Z5L7 613 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
PPM1F-202ENST00000397495 FOXP2O15409 715 aa18.18■□□□□ 0.5
PPM1F-202ENST00000397495 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
PPM1F-202ENST00000397495 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
PPM1F-202ENST00000397495 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
PPM1F-202ENST00000397495 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 MAGEB6P1A0A0J9YX57 407 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 FHDC1Q9C0D6 1143 aaPredicted RBP18.17■□□□□ 0.5
PPM1F-202ENST00000397495 GZF1Q9H116 711 aaPredicted RBP18.17■□□□□ 0.5
PPM1F-202ENST00000397495 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
PPM1F-202ENST00000397495 LARGE1O95461 756 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 APPP05067 770 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 MRE11P49959 708 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 DYNLL1P63167 89 aaKnown RBP18.17■□□□□ 0.5
PPM1F-202ENST00000397495 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 DIXDC1Q155Q3 683 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 ME3Q16798 604 aa18.17■□□□□ 0.5
PPM1F-202ENST00000397495 SRCAPQ6ZRS2 3230 aa18.16■□□□□ 0.5
PPM1F-202ENST00000397495 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
PPM1F-202ENST00000397495 TPCN1Q9ULQ1 816 aa18.16■□□□□ 0.5
PPM1F-202ENST00000397495 SMC3Q9UQE7 1217 aa18.16■□□□□ 0.5
PPM1F-202ENST00000397495 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
PPM1F-202ENST00000397495 PRKAB2O43741 272 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 CYP21A2P08686 494 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 HMGB1P09429 215 aaKnown RBP18.15■□□□□ 0.5
PPM1F-202ENST00000397495 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
PPM1F-202ENST00000397495 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
PPM1F-202ENST00000397495 CERS5Q8N5B7 392 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 RIOK1Q9BRS2 568 aaKnown RBP18.15■□□□□ 0.5
PPM1F-202ENST00000397495 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
PPM1F-202ENST00000397495 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
PPM1F-202ENST00000397495 F8W031 263 aaPredicted RBP18.14■□□□□ 0.5
PPM1F-202ENST00000397495 FGAP02671 866 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 ZSCAN22P10073 491 aaPredicted RBP18.14■□□□□ 0.5
PPM1F-202ENST00000397495 SYT1P21579 422 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 ZNF445P59923 1031 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 GSTO1P78417 241 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.5
PPM1F-202ENST00000397495 ZNF646O15015 1829 aaPredicted RBP18.14■□□□□ 0.49
PPM1F-202ENST00000397495 STX6O43752 255 aa18.14■□□□□ 0.49
PPM1F-202ENST00000397495 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
PPM1F-202ENST00000397495 TMED8Q6PL24 325 aaPredicted RBP18.14■□□□□ 0.49
PPM1F-202ENST00000397495 COL4A5P29400 1685 aa18.14■□□□□ 0.49
PPM1F-202ENST00000397495 USP17L3A6NCW0 530 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 USP17L4A6NCW7 530 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 PATL2C9JE40 543 aaKnown RBP18.13■□□□□ 0.49
PPM1F-202ENST00000397495 NFKBIEO00221 500 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 IGSF3O75054 1194 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 MBD3O95983 291 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 GNAT2P19087 354 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 IARSP41252 1262 aaKnown RBP18.13■□□□□ 0.49
PPM1F-202ENST00000397495 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
PPM1F-202ENST00000397495 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 USP17L1Q7RTZ2 530 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 FBXL16Q8N461 479 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 AGXT2Q9BYV1 514 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 CTNNA3Q9UI47 895 aa18.13■□□□□ 0.49
PPM1F-202ENST00000397495 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 LDHCP07864 332 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 GPT2Q8TD30 523 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 SDR42E1Q8WUS8 393 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 MROH7-TTC4A0A0A0MT08 1334 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 GJB2P29033 226 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 HAND2P61296 217 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 DACT2Q5SW24 774 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 IFNL3Q8IZI9 196 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 EPB41L4AQ9HCS5 686 aaPredicted RBP18.12■□□□□ 0.49
PPM1F-202ENST00000397495 TTF2Q9UNY4 1162 aaKnown RBP18.12■□□□□ 0.49
PPM1F-202ENST00000397495 SUGT1Q9Y2Z0 365 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 ATP6V1DQ9Y5K8 247 aa18.12■□□□□ 0.49
PPM1F-202ENST00000397495 PSME4Q14997 1843 aa18.11■□□□□ 0.49
PPM1F-202ENST00000397495 IMMTQ16891 758 aaKnown RBP18.11■□□□□ 0.49
PPM1F-202ENST00000397495 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
PPM1F-202ENST00000397495 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
PPM1F-202ENST00000397495 NOL10Q9BSC4 688 aaKnown RBP18.11■□□□□ 0.49
PPM1F-202ENST00000397495 SYT17Q9BSW7 474 aa18.11■□□□□ 0.49
PPM1F-202ENST00000397495 NAPBQ9H115 298 aa18.11■□□□□ 0.49
PPM1F-202ENST00000397495 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
PPM1F-202ENST00000397495 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
PPM1F-202ENST00000397495 RAD17O75943 681 aa18.1■□□□□ 0.49
PPM1F-202ENST00000397495 F13A1P00488 732 aa18.1■□□□□ 0.49
PPM1F-202ENST00000397495 TDO2P48775 406 aa18.1■□□□□ 0.49
PPM1F-202ENST00000397495 SCNN1DP51172 638 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms