RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 SLC39A14Q15043 492 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 FOXP4Q8IVH2 680 aaPredicted RBP22.78■■□□□ 1.24
AGAP3-202ENST00000397238 C10orf67Q8IYJ2 551 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 MYL10Q9BUA6 226 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 CCDC191Q8NCU4 936 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 C19orf44Q9H6X5 657 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 ATG9AQ7Z3C6 839 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 CCDC82Q8N4S0 544 aa22.78■■□□□ 1.24
AGAP3-202ENST00000397238 ARHGAP6O43182 974 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 HEG1Q9ULI3 1381 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 TUBB4AP04350 444 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 ZSCAN26Q16670 478 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 GRAMD1CQ8IYS0 662 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 TXLNBQ8N3L3 684 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 INTS13Q9NVM9 706 aa22.77■■□□□ 1.24
AGAP3-202ENST00000397238 KCNJ6P48051 423 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 ZNF213O14771 459 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 KRT40Q6A162 431 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 METTL16Q86W50 562 aaKnown RBP22.76■■□□□ 1.23
AGAP3-202ENST00000397238 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 TRIM66O15016 1216 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 ADORA1P30542 326 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 ANTXR2P58335 489 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 TTC39AQ5SRH9 613 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 CCDC102BQ68D86 513 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 PUS7LQ9H0K6 701 aaKnown RBP22.76■■□□□ 1.23
AGAP3-202ENST00000397238 ZBTB3Q9H5J0 574 aa22.76■■□□□ 1.23
AGAP3-202ENST00000397238 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 A0A0U1RQJ8 604 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 TPM1P09493 284 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 RABL6Q3YEC7 729 aaPredicted RBP22.75■■□□□ 1.23
AGAP3-202ENST00000397238 NCOA7Q8NI08 942 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 ATRIPQ8WXE1 791 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 FEZ2Q9UHY8 353 aaPredicted RBP22.75■■□□□ 1.23
AGAP3-202ENST00000397238 NFE2L3Q9Y4A8 694 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 PALLDQ8WX93 1383 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 WWC2Q6AWC2 1192 aa22.75■■□□□ 1.23
AGAP3-202ENST00000397238 TULP2O00295 520 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 TFRCP02786 760 aaKnown RBP22.74■■□□□ 1.23
AGAP3-202ENST00000397238 SKIDA1Q1XH10 827 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 NFXL1Q6ZNB6 911 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 CREBRFQ8IUR6 639 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 GPR161Q8N6U8 529 aaKnown RBP22.74■■□□□ 1.23
AGAP3-202ENST00000397238 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 MPHOSPH8Q99549 860 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 SENP2Q9HC62 589 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 KCNH3Q9ULD8 1083 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 MAP3K9P80192 1104 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 LCMT1Q9UIC8 334 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 RGPD2P0DJD1 1756 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
AGAP3-202ENST00000397238 BMP6P22004 513 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 METAP2P50579 478 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■□□□ 13.4
AGAP3-202ENST00000397238 DHX8Q14562 1220 aaKnown RBP22.74■■□□□ 1.23
AGAP3-202ENST00000397238 KLHL10Q6JEL2 608 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 TMEM139Q8IV31 216 aa22.74■■□□□ 1.23
AGAP3-202ENST00000397238 MED1Q15648 1581 aaPredicted RBP22.74■■□□□ 1.23
AGAP3-202ENST00000397238 TRDNQ13061 729 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 INCENPQ9NQS7 918 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 VPS18Q9P253 973 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 TUBE1Q9UJT0 475 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 PHACTR2O75167 634 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 LONRF2Q1L5Z9 754 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 JMYQ8N9B5 988 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 ADAM21Q9UKJ8 722 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 MRFAP1Q9Y605 127 aa22.73■■□□□ 1.23
AGAP3-202ENST00000397238 SOWAHDA6NJG2 315 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 SCARF1Q14162 830 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 SUGCTQ9HAC7 445 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 SAMSN1Q9NSI8 373 aaKnown RBP22.72■■□□□ 1.23
AGAP3-202ENST00000397238 H3BQF6 201 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 FOXO4P98177 505 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 FMR1Q06787 632 aaKnown RBP eCLIP22.72■■□□□ 1.239e-7■■■■■ 34.6
AGAP3-202ENST00000397238 TTLL7Q6ZT98 887 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 GOLGA1Q92805 767 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 TRIM29Q14134 588 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 MRPL44Q9H9J2 332 aaKnown RBP22.72■■□□□ 1.23
AGAP3-202ENST00000397238 CEP126Q9P2H0 1117 aa22.72■■□□□ 1.23
AGAP3-202ENST00000397238 STX17P56962 302 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 GRIN1Q05586 938 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 MB21D2Q8IYB1 491 aaPredicted RBP22.71■■□□□ 1.23
AGAP3-202ENST00000397238 TC2NQ8N9U0 490 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 FUT8Q9BYC5 575 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 PDE11AQ9HCR9 933 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 RHOXF2BP0C7M4 288 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 IL15P40933 162 aaPredicted RBP22.71■■□□□ 1.23
AGAP3-202ENST00000397238 ZAP70P43403 619 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 FAM193AP78312 1265 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 RHOXF2Q9BQY4 288 aa22.71■■□□□ 1.23
AGAP3-202ENST00000397238 FOXP2O15409 715 aa22.7■■□□□ 1.23
AGAP3-202ENST00000397238 PRR29P0C7W0 189 aa22.7■■□□□ 1.23
AGAP3-202ENST00000397238 AK7Q96M32 723 aa22.7■■□□□ 1.23
AGAP3-202ENST00000397238 LTN1O94822 1766 aa22.7■■□□□ 1.22
AGAP3-202ENST00000397238 EYA2O00167 538 aa22.7■■□□□ 1.22
AGAP3-202ENST00000397238 POLR2DO15514 142 aaKnown RBP22.7■■□□□ 1.22
AGAP3-202ENST00000397238 COBLO75128 1261 aa22.7■■□□□ 1.22
AGAP3-202ENST00000397238 SPECC1LQ69YQ0 1117 aa22.7■■□□□ 1.22
AGAP3-202ENST00000397238 RFX7Q2KHR2 1363 aa22.7■■□□□ 1.22
AGAP3-202ENST00000397238 CERS3Q8IU89 383 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms