RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 GMPSP49915 693 aaPredicted RBP17.78■□□□□ 0.44
CAPN3-207ENST00000397200 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
CAPN3-207ENST00000397200 ADGRA1Q86SQ6 560 aa17.78■□□□□ 0.44
CAPN3-207ENST00000397200 OSBP2Q969R2 916 aa17.78■□□□□ 0.44
CAPN3-207ENST00000397200 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
CAPN3-207ENST00000397200 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
CAPN3-207ENST00000397200 NOL10Q9BSC4 688 aaKnown RBP17.78■□□□□ 0.44
CAPN3-207ENST00000397200 PUS7LQ9H0K6 701 aaKnown RBP17.78■□□□□ 0.44
CAPN3-207ENST00000397200 ADAMTSL1Q8N6G6 1762 aa17.78■□□□□ 0.44
CAPN3-207ENST00000397200 M0R2C6 588 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 HHIPL2Q6UWX4 724 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 MIGA1Q8NAN2 632 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 DPF2Q92785 391 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 KCNB2Q92953 911 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 AIDAQ96BJ3 306 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
CAPN3-207ENST00000397200 MRIQ9BWK5 157 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
CAPN3-207ENST00000397200 GAKO14976 1311 aa17.77■□□□□ 0.43
CAPN3-207ENST00000397200 MAGEB6P1A0A0J9YX57 407 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
CAPN3-207ENST00000397200 CRKP46108 304 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 MMP14P50281 582 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 GSE1Q14687 1217 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 CLEC17AQ6ZS10 378 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 MBD4O95243 580 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 BAG3O95817 575 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 RBM5P52756 815 aaKnown RBP eCLIP17.76■□□□□ 0.43
CAPN3-207ENST00000397200 CUL4AQ13619 759 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 TNPO1Q92973 898 aaKnown RBP17.76■□□□□ 0.43
CAPN3-207ENST00000397200 CWC22Q9HCG8 908 aaKnown RBP17.76■□□□□ 0.43
CAPN3-207ENST00000397200 AATFQ9NY61 560 aaKnown RBP eCLIP17.76■□□□□ 0.43
CAPN3-207ENST00000397200 DAGLAQ9Y4D2 1042 aa17.76■□□□□ 0.43
CAPN3-207ENST00000397200 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
CAPN3-207ENST00000397200 GPAA1O43292 621 aa17.75■□□□□ 0.43
CAPN3-207ENST00000397200 DDNO94850 711 aaPredicted RBP17.75■□□□□ 0.43
CAPN3-207ENST00000397200 BTDP43251 543 aa17.75■□□□□ 0.43
CAPN3-207ENST00000397200 NEK4P51957 841 aa17.75■□□□□ 0.43
CAPN3-207ENST00000397200 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
CAPN3-207ENST00000397200 GPR75-ASB3A0A0A6YYF3 556 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 DYNLL1P63167 89 aaKnown RBP17.74■□□□□ 0.43
CAPN3-207ENST00000397200 CFAP100Q494V2 611 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-207ENST00000397200 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 ZDHHC15Q96MV8 337 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 ARMT1Q9H993 441 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
CAPN3-207ENST00000397200 SNX14Q9Y5W7 946 aa17.74■□□□□ 0.43
CAPN3-207ENST00000397200 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
CAPN3-207ENST00000397200 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
CAPN3-207ENST00000397200 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
CAPN3-207ENST00000397200 LCORLQ8N3X6 602 aa17.73■□□□□ 0.43
CAPN3-207ENST00000397200 RIOK1Q9BRS2 568 aaKnown RBP17.73■□□□□ 0.43
CAPN3-207ENST00000397200 GLTPD2A6NH11 291 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 PLCG2P16885 1265 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 PPP4CP60510 307 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 DLGAP5Q15398 846 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 STRBPQ96SI9 672 aaKnown RBP17.72■□□□□ 0.43
CAPN3-207ENST00000397200 MYOZ2Q9NPC6 264 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 GPRC5DQ9NZD1 345 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 SHTN1A0MZ66 631 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 H7C1D1 291 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
CAPN3-207ENST00000397200 NUCB2P80303 420 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 ECM29Q5VYK3 1845 aa17.72■□□□□ 0.43
CAPN3-207ENST00000397200 GNAT2P19087 354 aa17.71■□□□□ 0.43
CAPN3-207ENST00000397200 APOBEC3HQ6NTF7 200 aaKnown RBP17.71■□□□□ 0.43
CAPN3-207ENST00000397200 MTMR14Q8NCE2 650 aa17.71■□□□□ 0.43
CAPN3-207ENST00000397200 INTS4Q96HW7 963 aaKnown RBP17.71■□□□□ 0.43
CAPN3-207ENST00000397200 TTC14Q96N46 770 aa17.71■□□□□ 0.43
CAPN3-207ENST00000397200 GBP4Q96PP9 640 aa17.71■□□□□ 0.43
CAPN3-207ENST00000397200 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
CAPN3-207ENST00000397200 PCDHAC2Q9Y5I4 1007 aa17.71■□□□□ 0.43
CAPN3-207ENST00000397200 CDK5RAP2Q96SN8 1893 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 PTH1RQ03431 593 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-207ENST00000397200 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
CAPN3-207ENST00000397200 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 SLC4A4Q9Y6R1 1079 aa17.7■□□□□ 0.42
CAPN3-207ENST00000397200 PTMSP20962 102 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 RBM26Q5T8P6 1007 aaKnown RBP17.69■□□□□ 0.42
CAPN3-207ENST00000397200 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 RASEFQ8IZ41 740 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 MAP4K1Q92918 833 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
CAPN3-207ENST00000397200 RPAP1Q9BWH6 1393 aaPredicted RBP17.69■□□□□ 0.42
CAPN3-207ENST00000397200 APPP05067 770 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
CAPN3-207ENST00000397200 EPS15P42566 896 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 RHBDL3P58872 404 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
CAPN3-207ENST00000397200 TBC1D10BQ4KMP7 808 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms