RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
SEC13-209ENST00000397117 MANSC4A6NHS7 340 aaPredicted RBP16.08■□□□□ 0.17
SEC13-209ENST00000397117 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.17
SEC13-209ENST00000397117 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.17
SEC13-209ENST00000397117 SLC10A4Q96EP9 437 aa16.08■□□□□ 0.17
SEC13-209ENST00000397117 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.17
SEC13-209ENST00000397117 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 TAF5LO75529 589 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 DLGAP5Q15398 846 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 LPIN2Q92539 896 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 SSC5DA1L4H1 1573 aa16.08■□□□□ 0.16
SEC13-209ENST00000397117 A0A1B0GUL6 1792 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 KIAA0100Q14667 2235 aaKnown RBP16.07■□□□□ 0.16
SEC13-209ENST00000397117 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 SNAP23O00161 211 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 ZBTB48P10074 688 aaPredicted RBP16.07■□□□□ 0.16
SEC13-209ENST00000397117 SLC5A1P13866 664 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 CLMNQ96JQ2 1002 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 PCDHAC2Q9Y5I4 1007 aa16.07■□□□□ 0.16
SEC13-209ENST00000397117 IFIT1P09914 478 aaKnown RBP16.06■□□□□ 0.16
SEC13-209ENST00000397117 SDSP20132 328 aa16.06■□□□□ 0.16
SEC13-209ENST00000397117 KCNJ4P48050 445 aa16.06■□□□□ 0.16
SEC13-209ENST00000397117 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
SEC13-209ENST00000397117 WNK4Q96J92 1243 aa16.06■□□□□ 0.16
SEC13-209ENST00000397117 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
SEC13-209ENST00000397117 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
SEC13-209ENST00000397117 IL1R1P14778 569 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 ATP5JP18859 108 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 OTOP1Q7RTM1 612 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 PPP1R12BO60237 982 aaPredicted RBP16.05■□□□□ 0.16
SEC13-209ENST00000397117 FGFR2P21802 821 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 ADORA1P30542 326 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 FKBP1AP62942 108 aaKnown RBP16.05■□□□□ 0.16
SEC13-209ENST00000397117 TTC39AQ5SRH9 613 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 PRMT6Q96LA8 375 aaPredicted RBP16.05■□□□□ 0.16
SEC13-209ENST00000397117 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
SEC13-209ENST00000397117 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 CDC45O75419 566 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
SEC13-209ENST00000397117 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
SEC13-209ENST00000397117 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 UBE4AQ14139 1066 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 CFAP100Q494V2 611 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
SEC13-209ENST00000397117 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
SEC13-209ENST00000397117 GJA5P36382 358 aa16.03■□□□□ 0.16
SEC13-209ENST00000397117 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
SEC13-209ENST00000397117 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
SEC13-209ENST00000397117 CLRN2A0PK11 232 aa16.02■□□□□ 0.16
SEC13-209ENST00000397117 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
SEC13-209ENST00000397117 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.16
SEC13-209ENST00000397117 TESPA1A2RU30 521 aaPredicted RBP16.01■□□□□ 0.15
SEC13-209ENST00000397117 F8W031 263 aaPredicted RBP16.01■□□□□ 0.15
SEC13-209ENST00000397117 MYO1BO43795 1136 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 ZNF804AQ7Z570 1209 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
SEC13-209ENST00000397117 EVI5LQ96CN4 794 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
SEC13-209ENST00000397117 PTPN18Q99952 460 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 HTTP42858 3142 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 IREB2P48200 963 aaKnown RBP16.01■□□□□ 0.15
SEC13-209ENST00000397117 CRHR2Q13324 411 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 RASA3Q14644 834 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 HAUS7Q99871 368 aa16.01■□□□□ 0.15
SEC13-209ENST00000397117 OTOFQ9HC10 1997 aa16■□□□□ 0.15
SEC13-209ENST00000397117 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
SEC13-209ENST00000397117 CAVIN4Q5BKX8 364 aa16■□□□□ 0.15
SEC13-209ENST00000397117 CCDC102BQ68D86 513 aa16■□□□□ 0.15
SEC13-209ENST00000397117 OTUD7BQ6GQQ9 843 aa16■□□□□ 0.15
SEC13-209ENST00000397117 VPS37DQ86XT2 251 aa16■□□□□ 0.15
SEC13-209ENST00000397117 CD99L2Q8TCZ2 262 aa16■□□□□ 0.15
SEC13-209ENST00000397117 VEZTQ9HBM0 779 aa16■□□□□ 0.15
SEC13-209ENST00000397117 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
SEC13-209ENST00000397117 CAP1Q01518 475 aa15.99■□□□□ 0.15
SEC13-209ENST00000397117 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
SEC13-209ENST00000397117 ARMC5Q96C12 935 aa15.99■□□□□ 0.15
SEC13-209ENST00000397117 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
SEC13-209ENST00000397117 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
SEC13-209ENST00000397117 JAG2Q9Y219 1238 aa15.99■□□□□ 0.15
SEC13-209ENST00000397117 PHKA1P46020 1223 aa15.98■□□□□ 0.15
SEC13-209ENST00000397117 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
SEC13-209ENST00000397117 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
SEC13-209ENST00000397117 BCAMP50895 628 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 SP3Q02447 781 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 HABP4Q5JVS0 413 aaKnown RBP15.97■□□□□ 0.15
SEC13-209ENST00000397117 MS4A4AQ96JQ5 239 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 FSD1Q9BTV5 496 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 EFCC1Q9HA90 598 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms