RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 ANTXR1Q9H6X2 564 aa25.45■■□□□ 1.66
SEC13-207ENST00000397105 IDH1O75874 414 aaKnown RBP25.44■■□□□ 1.66
SEC13-207ENST00000397105 BTDP43251 543 aa25.44■■□□□ 1.66
SEC13-207ENST00000397105 FKBP1BP68106 108 aa25.44■■□□□ 1.66
SEC13-207ENST00000397105 DEFB115Q30KQ5 88 aa25.44■■□□□ 1.66
SEC13-207ENST00000397105 SMC5Q8IY18 1101 aa25.44■■□□□ 1.66
SEC13-207ENST00000397105 HAUS7Q99871 368 aa25.44■■□□□ 1.66
SEC13-207ENST00000397105 RASSF10A6NK89 507 aa25.43■■□□□ 1.66
SEC13-207ENST00000397105 GOLIM4O00461 696 aa25.43■■□□□ 1.66
SEC13-207ENST00000397105 TMED8Q6PL24 325 aaPredicted RBP25.43■■□□□ 1.66
SEC13-207ENST00000397105 FAM83AQ86UY5 434 aa25.43■■□□□ 1.66
SEC13-207ENST00000397105 KLRG1Q96E93 195 aa25.43■■□□□ 1.66
SEC13-207ENST00000397105 NOL10Q9BSC4 688 aaKnown RBP25.43■■□□□ 1.66
SEC13-207ENST00000397105 MKRN1Q9UHC7 482 aaKnown RBP25.43■■□□□ 1.66
SEC13-207ENST00000397105 PAG1Q9NWQ8 432 aa25.42■■□□□ 1.66
SEC13-207ENST00000397105 AKAP11Q9UKA4 1901 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 BAG3O95817 575 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 MAP4K4O95819 1239 aaPredicted RBP25.41■■□□□ 1.66
SEC13-207ENST00000397105 HUNKP57058 714 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 TTLL12Q14166 644 aaPredicted RBP25.41■■□□□ 1.66
SEC13-207ENST00000397105 HHIPL1Q96JK4 782 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 TMEM39BQ9GZU3 492 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 CNTNAP1P78357 1384 aa25.41■■□□□ 1.66
SEC13-207ENST00000397105 TTC41PQ6P2S7 1318 aa25.4■■□□□ 1.66
SEC13-207ENST00000397105 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
SEC13-207ENST00000397105 NBPF12Q5TAG4 269 aaPredicted RBP25.4■■□□□ 1.66
SEC13-207ENST00000397105 B4GALNT3Q6L9W6 998 aa25.4■■□□□ 1.66
SEC13-207ENST00000397105 TRPM7Q96QT4 1865 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 PPP1R12BO60237 982 aaPredicted RBP25.39■■□□□ 1.66
SEC13-207ENST00000397105 CYP7A1P22680 504 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 MAGEB6Q8N7X4 407 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 FAM151AQ8WW52 585 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 TEPSINQ96N21 525 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 IDI2Q9BXS1 227 aa25.39■■□□□ 1.66
SEC13-207ENST00000397105 ERC2O15083 957 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 MX1P20591 662 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 RHBDL3P58872 404 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 TCP10Q12799 353 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 NFIAQ12857 509 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 TSHZ3Q63HK5 1081 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 PAXIP1Q6ZW49 1069 aaPredicted RBP25.38■■□□□ 1.65
SEC13-207ENST00000397105 ARMC9Q7Z3E5 817 aa25.38■■□□□ 1.65
SEC13-207ENST00000397105 OTUD7AQ8TE49 926 aaPredicted RBP25.38■■□□□ 1.65
SEC13-207ENST00000397105 PLCG2P16885 1265 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 ECE1P42892 770 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 PPP4CP60510 307 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 NUCB1Q02818 461 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 PRKG1Q13976 671 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 SLC9C2Q5TAH2 1124 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 ADGRA1Q86SQ6 560 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 HOOK2Q96ED9 719 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 EDC3Q96F86 508 aaKnown RBP25.37■■□□□ 1.65
SEC13-207ENST00000397105 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
SEC13-207ENST00000397105 FAM198AQ9UFP1 575 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 ECM29Q5VYK3 1845 aa25.37■■□□□ 1.65
SEC13-207ENST00000397105 ENTPD3O75355 529 aa25.36■■□□□ 1.65
SEC13-207ENST00000397105 WDHD1O75717 1129 aaPredicted RBP25.36■■□□□ 1.65
SEC13-207ENST00000397105 GLRX3O76003 335 aaKnown RBP25.36■■□□□ 1.65
SEC13-207ENST00000397105 VEGFBP49765 207 aa25.36■■□□□ 1.65
SEC13-207ENST00000397105 CHD1LQ86WJ1 897 aa25.36■■□□□ 1.65
SEC13-207ENST00000397105 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
SEC13-207ENST00000397105 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.36■■□□□ 1.659e-8■■□□□ 11.6
SEC13-207ENST00000397105 UBE2Q2LH0YL09 131 aa25.35■■□□□ 1.65
SEC13-207ENST00000397105 RGS3P49796 1198 aa25.35■■□□□ 1.65
SEC13-207ENST00000397105 MOB2Q70IA6 237 aa25.35■■□□□ 1.65
SEC13-207ENST00000397105 CERS3Q8IU89 383 aa25.35■■□□□ 1.65
SEC13-207ENST00000397105 ANGEL1Q9UNK9 670 aaKnown RBP25.35■■□□□ 1.65
SEC13-207ENST00000397105 MYH2Q9UKX2 1941 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 NPM3O75607 178 aaKnown RBP25.34■■□□□ 1.65
SEC13-207ENST00000397105 PDE6AP16499 860 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 CYP4F22Q6NT55 531 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 RGMBQ6NW40 437 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 CDAN1Q8IWY9 1227 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 TEX11Q8IYF3 940 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 SH3RF3Q8TEJ3 882 aaPredicted RBP25.34■■□□□ 1.65
SEC13-207ENST00000397105 CAPNS2Q96L46 248 aa25.34■■□□□ 1.65
SEC13-207ENST00000397105 ZNF157P51786 506 aaPredicted RBP25.33■■□□□ 1.65
SEC13-207ENST00000397105 PI4K2BQ8TCG2 481 aa25.33■■□□□ 1.65
SEC13-207ENST00000397105 CCDC102AQ96A19 550 aa25.33■■□□□ 1.65
SEC13-207ENST00000397105 STAP2Q9UGK3 403 aa25.33■■□□□ 1.65
SEC13-207ENST00000397105 SALL3Q9BXA9 1300 aa25.33■■□□□ 1.64
SEC13-207ENST00000397105 WDR33Q9C0J8 1336 aaKnown RBP25.33■■□□□ 1.64
SEC13-207ENST00000397105 RPAP1Q9BWH6 1393 aaPredicted RBP25.32■■□□□ 1.64
SEC13-207ENST00000397105 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
SEC13-207ENST00000397105 GRM1Q13255 1194 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 PICALMQ13492 652 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 MAP3K11Q16584 847 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 ZSCAN25Q6NSZ9 544 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 ZFPM1Q8IX07 1006 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 MIGA1Q8NAN2 632 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 ZNF532Q9HCE3 1301 aa25.32■■□□□ 1.64
SEC13-207ENST00000397105 USP2O75604 605 aaPredicted RBP25.31■■□□□ 1.64
SEC13-207ENST00000397105 LDLRAD1Q5T700 205 aa25.31■■□□□ 1.64
SEC13-207ENST00000397105 DDX4Q9NQI0 724 aaKnown RBP25.31■■□□□ 1.64
SEC13-207ENST00000397105 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
SEC13-207ENST00000397105 PAPPA2Q9BXP8 1791 aa25.31■■□□□ 1.64
SEC13-207ENST00000397105 SSC5DA1L4H1 1573 aa25.31■■□□□ 1.64
SEC13-207ENST00000397105 RFX7Q2KHR2 1363 aa25.31■■□□□ 1.64
SEC13-207ENST00000397105 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
SEC13-207ENST00000397105 PDE1AP54750 535 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms