RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 SEZ6L2Q6UXD5 910 aa8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 PI4K2BQ8TCG2 481 aa8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 KRTAP4-9Q9BYQ8 210 aa8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 GSX1Q9H4S2 264 aaPredicted RBP8.08□□□□□ -1.12
RAPGEF4-202ENST00000397085 A0A1W2PP55 124 aa8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 DYNC1LI2O43237 492 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 NPR3P17342 541 aa8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 FUT4P22083 530 aa8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 GRIA4P48058 902 aa8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
RAPGEF4-202ENST00000397085 CARMIL2Q6F5E8 1435 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 B3GALT4O96024 378 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 NEFLP07196 543 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 FAM87AP0C7U9 286 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 AP3B2Q13367 1082 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 FBLN7Q53RD9 439 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 GJD3Q8N144 294 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 VAV3Q9UKW4 847 aa8.06□□□□□ -1.12
RAPGEF4-202ENST00000397085 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 FZD6O60353 706 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 ECEL1O95672 775 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 SLFN14P0C7P3 912 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 CD8BP10966 210 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 PRKCQQ04759 706 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 TCF12Q99081 682 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 TRIM56Q9BRZ2 755 aaKnown RBP8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 WDR18Q9BV38 432 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
RAPGEF4-202ENST00000397085 RNASE1P07998 156 aaKnown RBP8.04□□□□□ -1.12
RAPGEF4-202ENST00000397085 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
RAPGEF4-202ENST00000397085 CDK5R2Q13319 367 aa8.04□□□□□ -1.12
RAPGEF4-202ENST00000397085 GLIS3Q8NEA6 775 aa8.04□□□□□ -1.12
RAPGEF4-202ENST00000397085 EHD4Q9H223 541 aa8.04□□□□□ -1.12
RAPGEF4-202ENST00000397085 ABL1P00519 1130 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 SSFA2P28290 1259 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 FAM181AQ8N9Y4 354 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 HRASLS5Q96KN8 279 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 ZNF576Q9H609 170 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
RAPGEF4-202ENST00000397085 AOC3Q16853 763 aa8.02□□□□□ -1.13
RAPGEF4-202ENST00000397085 WFDC3Q8IUB2 231 aa8.02□□□□□ -1.13
RAPGEF4-202ENST00000397085 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
RAPGEF4-202ENST00000397085 TMPRSS2O15393 492 aa8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 RNGTTO60942 597 aaKnown RBP8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 ID3Q02535 119 aa8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 KIAA0319Q5VV43 1072 aa8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 SMYD4Q8IYR2 804 aaPredicted RBP8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 FAM84AQ96KN4 292 aa8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 MKNK2Q9HBH9 465 aa8.01□□□□□ -1.13
RAPGEF4-202ENST00000397085 TMEM265A0A087WTH1 108 aa8□□□□□ -1.13
RAPGEF4-202ENST00000397085 LIG1P18858 919 aa8□□□□□ -1.13
RAPGEF4-202ENST00000397085 LRRN4CLQ8ND94 238 aa8□□□□□ -1.13
RAPGEF4-202ENST00000397085 FAM53CQ9NYF3 392 aa8□□□□□ -1.13
RAPGEF4-202ENST00000397085 CRIM1Q9NZV1 1036 aa8□□□□□ -1.13
RAPGEF4-202ENST00000397085 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 ITPKAP23677 461 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 PTPN12Q05209 780 aaKnown RBP7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 SPOCD1Q6ZMY3 1216 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 FANCD2OSQ96PS1 177 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 SSU72Q9NP77 194 aaKnown RBP7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 BRPF3Q9ULD4 1205 aa7.99□□□□□ -1.13
RAPGEF4-202ENST00000397085 CEACAM5P06731 702 aa7.98□□□□□ -1.13
RAPGEF4-202ENST00000397085 CD96P40200 585 aa7.98□□□□□ -1.13
RAPGEF4-202ENST00000397085 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
RAPGEF4-202ENST00000397085 ANO2Q9NQ90 1003 aa7.98□□□□□ -1.13
RAPGEF4-202ENST00000397085 PCOLCE2Q9UKZ9 415 aa7.98□□□□□ -1.13
RAPGEF4-202ENST00000397085 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
RAPGEF4-202ENST00000397085 BHLHE22Q8NFJ8 381 aaPredicted RBP7.97□□□□□ -1.13
RAPGEF4-202ENST00000397085 CCDC86Q9H6F5 360 aaKnown RBP7.97□□□□□ -1.13
RAPGEF4-202ENST00000397085 CPNE3O75131 537 aaKnown RBP7.96□□□□□ -1.14
RAPGEF4-202ENST00000397085 ZNF211Q13398 564 aaPredicted RBP7.96□□□□□ -1.14
RAPGEF4-202ENST00000397085 RPS26P11Q5JNZ5 115 aaPredicted RBP7.96□□□□□ -1.14
RAPGEF4-202ENST00000397085 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.14
RAPGEF4-202ENST00000397085 TOX2Q96NM4 488 aa7.96□□□□□ -1.14
RAPGEF4-202ENST00000397085 TMEM88BA6NKF7 163 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 ITIH2P19823 946 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 ZNF157P51786 506 aaPredicted RBP7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 KCNMB1Q16558 191 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 ZSWIM9Q86XI8 627 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 NPHS2Q9NP85 383 aa7.95□□□□□ -1.14
RAPGEF4-202ENST00000397085 LEFTY1O75610 366 aa7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 HCLS1P14317 486 aaPredicted RBP7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 RAP1GAPP47736 663 aa7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 OXCT1P55809 520 aa7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 PDE3BQ13370 1112 aa7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 MLANAQ16655 118 aa7.94□□□□□ -1.14
RAPGEF4-202ENST00000397085 KIF4BQ2VIQ3 1234 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms