RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 IQCA1LA6NCM1 817 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 M0R2C6 588 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
NUP98-205ENST00000397007 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
NUP98-205ENST00000397007 JAG2Q9Y219 1238 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 SAMD7Q7Z3H4 446 aa12.89□□□□□ -0.35
NUP98-205ENST00000397007 ZNF532Q9HCE3 1301 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 FGRP09769 529 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
NUP98-205ENST00000397007 NEFLP07196 543 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 ZFYP08048 801 aaPredicted RBP12.88□□□□□ -0.35
NUP98-205ENST00000397007 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
NUP98-205ENST00000397007 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 PPP2R3BQ9Y5P8 575 aa12.88□□□□□ -0.35
NUP98-205ENST00000397007 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
NUP98-205ENST00000397007 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
NUP98-205ENST00000397007 CERS3Q8IU89 383 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
NUP98-205ENST00000397007 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
NUP98-205ENST00000397007 APPBP2Q92624 585 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 KCNB2Q92953 911 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 A0A0D9SFI3 127 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 CHMLP26374 656 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 GABPAQ06546 454 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 RAD50Q92878 1312 aa12.87□□□□□ -0.35
NUP98-205ENST00000397007 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
NUP98-205ENST00000397007 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 ALX1Q15699 326 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 NBPF3Q9H094 633 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 ENTPD3O75355 529 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 GSTO1P78417 241 aa12.86□□□□□ -0.35
NUP98-205ENST00000397007 NOVP48745 357 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 MAGEB6Q8N7X4 407 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 TBC1D12O60347 775 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
NUP98-205ENST00000397007 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
NUP98-205ENST00000397007 SH3RF3Q8TEJ3 882 aaPredicted RBP12.85□□□□□ -0.35
NUP98-205ENST00000397007 FLT1P17948 1338 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 BTDP43251 543 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 NFIAQ12857 509 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
NUP98-205ENST00000397007 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 EHD4Q9H223 541 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 DYNLL1P63167 89 aaKnown RBP12.84□□□□□ -0.35
NUP98-205ENST00000397007 FSTL1Q12841 308 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
NUP98-205ENST00000397007 SGSM2O43147 1006 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 EPB41L2O43491 1005 aaKnown RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 CNTROBQ8N137 903 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 YY1P25490 414 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 TBC1D10BQ4KMP7 808 aaPredicted RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
NUP98-205ENST00000397007 OSBPL5Q9H0X9 879 aaPredicted RBP12.83□□□□□ -0.36
NUP98-205ENST00000397007 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 H7C1D1 291 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 CST9Q5W186 159 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 APOBEC3FQ8IUX4 373 aaKnown RBP12.82□□□□□ -0.36
NUP98-205ENST00000397007 EVX2Q03828 476 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
NUP98-205ENST00000397007 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
NUP98-205ENST00000397007 DCP1AQ9NPI6 582 aaPredicted RBP12.82□□□□□ -0.36
NUP98-205ENST00000397007 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 TATDN1Q6P1N9 297 aa12.82□□□□□ -0.36
NUP98-205ENST00000397007 TOMM70O94826 608 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms