RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ANKRD13AQ8IZ07 590 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 SSH3Q8TE77 659 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 TEPSINQ96N21 525 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 IQSEC3Q9UPP2 1182 aaPredicted RBP21.31■■□□□ 1
TNFSF13-205ENST00000396545 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 CDAN1Q8IWY9 1227 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 KLHDC4Q8TBB5 520 aa21.31■■□□□ 1
TNFSF13-205ENST00000396545 HDLBPQ00341 1268 aaKnown RBP21.3■■□□□ 1
TNFSF13-205ENST00000396545 POLA2Q14181 598 aa21.3■■□□□ 1
TNFSF13-205ENST00000396545 TBC1D22AQ8WUA7 517 aa21.3■■□□□ 1
TNFSF13-205ENST00000396545 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
TNFSF13-205ENST00000396545 ERICH6Q7L0X2 663 aa21.29■■□□□ 1
TNFSF13-205ENST00000396545 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
TNFSF13-205ENST00000396545 CENPFP49454 3210 aa21.29■■□□□ 1
TNFSF13-205ENST00000396545 TCP10L2B9ZVM9 353 aa21.28■■□□□ 1
TNFSF13-205ENST00000396545 BCAMP50895 628 aa21.28■■□□□ 1
TNFSF13-205ENST00000396545 HSP90AB4PQ58FF6 505 aa21.28■■□□□ 1
TNFSF13-205ENST00000396545 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
TNFSF13-205ENST00000396545 TESPA1A2RU30 521 aaPredicted RBP21.27■■□□□ 1
TNFSF13-205ENST00000396545 FRAT2O75474 233 aaPredicted RBP21.27■■□□□ 1
TNFSF13-205ENST00000396545 SLC34A2O95436 690 aa21.27■■□□□ 1
TNFSF13-205ENST00000396545 FGFR2P21802 821 aa21.27■■□□□ 1
TNFSF13-205ENST00000396545 PUM3Q15397 648 aaKnown RBP21.27■■□□□ 1
TNFSF13-205ENST00000396545 PNMA6EA0A0J9YXQ4 647 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 RFX5P48382 616 aaPredicted RBP21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 TNNI2P48788 182 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 PLEKHM2Q8IWE5 1019 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 TEKT1Q969V4 418 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 PTPN18Q99952 460 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 ELP3Q9H9T3 547 aa21.27■□□□□ 0.99
TNFSF13-205ENST00000396545 SRGAP3O43295 1099 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 RAB11FIP3O75154 756 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 OPTNQ96CV9 577 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 ZDHHC15Q96MV8 337 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 UPF2Q9HAU5 1272 aaKnown RBP21.26■□□□□ 0.99
TNFSF13-205ENST00000396545 EYA2O00167 538 aa21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 IFIT1P09914 478 aaKnown RBP21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 CRHR2Q13324 411 aa21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 OTUD7BQ6GQQ9 843 aa21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 SUGT1Q9Y2Z0 365 aa21.25■□□□□ 0.99
TNFSF13-205ENST00000396545 VGLL4Q14135 290 aa21.24■□□□□ 0.99
TNFSF13-205ENST00000396545 MS4A4AQ96JQ5 239 aa21.24■□□□□ 0.99
TNFSF13-205ENST00000396545 CACNB3P54284 484 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 APOBEC3HQ6NTF7 200 aaKnown RBP21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 OTOP1Q7RTM1 612 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 TRIM17Q9Y577 477 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 MAST3O60307 1309 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 MAP3K9P80192 1104 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 ATG9AQ7Z3C6 839 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 LPIN2Q92539 896 aa21.23■□□□□ 0.99
TNFSF13-205ENST00000396545 MKI67P46013 3256 aaKnown RBP21.22■□□□□ 0.99
TNFSF13-205ENST00000396545 FKBP1CQ5VVH2 108 aa21.22■□□□□ 0.99
TNFSF13-205ENST00000396545 SLC5A1P13866 664 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 HHIPL2Q6UWX4 724 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 FAM83AQ86UY5 434 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 BRI3BPQ8WY22 251 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 ERO1AQ96HE7 468 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 TMOD2Q9NZR1 351 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 CSADQ9Y600 493 aa21.21■□□□□ 0.99
TNFSF13-205ENST00000396545 BRCA2P51587 3418 aa21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 TTC22Q5TAA0 569 aa21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 ERC1Q8IUD2 1116 aa21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 MYH13Q9UKX3 1938 aa21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 RPAP1Q9BWH6 1393 aaPredicted RBP21.2■□□□□ 0.98
TNFSF13-205ENST00000396545 SURF6O75683 361 aaKnown RBP21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 GTF2A2P52657 109 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 WDR66Q8TBY9 1149 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 CD99L2Q8TCZ2 262 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 OSBPL3Q9H4L5 887 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 FBXO3Q9UK99 471 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 SMARCA5O60264 1052 aaPredicted RBP21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 CIAO1O76071 339 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 SP3Q02447 781 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 OTUD5Q96G74 571 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 EXOC6BQ9Y2D4 811 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 SNCAIPQ9Y6H5 919 aa21.19■□□□□ 0.98
TNFSF13-205ENST00000396545 SALL3Q9BXA9 1300 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 SPDYE5A6NIY4 337 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 CAP1Q01518 475 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 CCL15Q16663 113 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 PTPN22Q9Y2R2 807 aa21.18■□□□□ 0.98
TNFSF13-205ENST00000396545 OTUD7AQ8TE49 926 aaPredicted RBP21.17■□□□□ 0.98
TNFSF13-205ENST00000396545 HOOK2Q96ED9 719 aa21.17■□□□□ 0.98
TNFSF13-205ENST00000396545 WRNIP1Q96S55 665 aa21.17■□□□□ 0.98
TNFSF13-205ENST00000396545 SIL1Q9H173 461 aa21.17■□□□□ 0.98
TNFSF13-205ENST00000396545 ATP2B3Q16720 1220 aa21.16■□□□□ 0.98
TNFSF13-205ENST00000396545 PRPF38BQ5VTL8 546 aaKnown RBP21.16■□□□□ 0.98
TNFSF13-205ENST00000396545 FAM43AQ8N2R8 423 aa21.16■□□□□ 0.98
TNFSF13-205ENST00000396545 EFCC1Q9HA90 598 aa21.16■□□□□ 0.98
TNFSF13-205ENST00000396545 MFAP1P55081 439 aaKnown RBP21.15■□□□□ 0.98
TNFSF13-205ENST00000396545 TAF1CQ15572 869 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms