RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 NEK11Q8NG66 645 aa18.52■□□□□ 0.56
PDE1C-202ENST00000396182 TMX1Q9H3N1 280 aa18.52■□□□□ 0.56
PDE1C-202ENST00000396182 ZNF202O95125 648 aa18.52■□□□□ 0.55
PDE1C-202ENST00000396182 REXO1L1PQ8IX06 675 aa18.52■□□□□ 0.55
PDE1C-202ENST00000396182 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.55
PDE1C-202ENST00000396182 DENND2AQ9ULE3 1009 aa18.52■□□□□ 0.55
PDE1C-202ENST00000396182 TRERF1Q96PN7 1200 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 CPLX1O14810 134 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 ATP8B1O43520 1251 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 DHX16O60231 1041 aaKnown RBP18.51■□□□□ 0.55
PDE1C-202ENST00000396182 SASH3O75995 380 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 TBC1D8O95759 1140 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 RAD51AP2Q09MP3 1159 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 AXDND1Q5T1B0 1012 aaPredicted RBP18.51■□□□□ 0.55
PDE1C-202ENST00000396182 NCOA7Q8NI08 942 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
PDE1C-202ENST00000396182 DPF2Q92785 391 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 ADAMTSL3P82987 1691 aa18.51■□□□□ 0.55
PDE1C-202ENST00000396182 ZFYP08048 801 aaPredicted RBP18.5■□□□□ 0.55
PDE1C-202ENST00000396182 TPM1P09493 284 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 SYNE3Q6ZMZ3 975 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 APPBP2Q92624 585 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 ISCA1Q9BUE6 129 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 GPAA1O43292 621 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 PFKFB1P16118 471 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 KIF23Q02241 960 aaPredicted RBP18.5■□□□□ 0.55
PDE1C-202ENST00000396182 ANO1Q5XXA6 986 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 ISM2Q6H9L7 571 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 TXLNBQ8N3L3 684 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 AKAP2Q9Y2D5 859 aa18.5■□□□□ 0.55
PDE1C-202ENST00000396182 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
PDE1C-202ENST00000396182 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 ZNF213O14771 459 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 WDHD1O75717 1129 aaPredicted RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 ST5P78524 1137 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 CC2D1AQ6P1N0 951 aaPredicted RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 BRAPQ7Z569 592 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 RALYLQ86SE5 291 aaKnown RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 FCHSD1Q86WN1 690 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 AIFM3Q96NN9 605 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 VWA3AA6NCI4 1184 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 OAS2P29728 719 aaKnown RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 MARCKSP29966 332 aaPredicted RBP18.49■□□□□ 0.55
PDE1C-202ENST00000396182 MUM1L1Q5H9M0 696 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 SMARCE1Q969G3 411 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 TSPYL1Q9H0U9 437 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 EPC1Q9H2F5 836 aa18.49■□□□□ 0.55
PDE1C-202ENST00000396182 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 UBASH3AP57075 661 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 GOLGA8FQ08AF8 430 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 GOLGA8DPQ0D2H9 430 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 NBPF3Q9H094 633 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 PCDH11XQ9BZA7 1347 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 PCDH11YQ9BZA8 1340 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 CMA1P23946 247 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 TMEM139Q8IV31 216 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
PDE1C-202ENST00000396182 FEZ2Q9UHY8 353 aaPredicted RBP18.48■□□□□ 0.55
PDE1C-202ENST00000396182 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 CBFA2T2O43439 604 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 ZSCAN12O43309 604 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 SERPINC1P01008 464 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 RXRAP19793 462 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 MYL5Q02045 173 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 CFAP100Q494V2 611 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 ZCCHC17Q9NP64 241 aaKnown RBP18.47■□□□□ 0.55
PDE1C-202ENST00000396182 TUBE1Q9UJT0 475 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 PPP2R2CQ9Y2T4 447 aa18.47■□□□□ 0.55
PDE1C-202ENST00000396182 MCAMP43121 646 aa18.46■□□□□ 0.55
PDE1C-202ENST00000396182 SLC39A14Q15043 492 aa18.46■□□□□ 0.55
PDE1C-202ENST00000396182 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
PDE1C-202ENST00000396182 GPR161Q8N6U8 529 aaKnown RBP18.46■□□□□ 0.55
PDE1C-202ENST00000396182 TNS3Q68CZ2 1445 aa18.46■□□□□ 0.55
PDE1C-202ENST00000396182 SPATA31A3Q5VYP0 1347 aa18.46■□□□□ 0.55
PDE1C-202ENST00000396182 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 SMC1AQ14683 1233 aaKnown RBP18.45■□□□□ 0.54
PDE1C-202ENST00000396182 CYB5R4Q7L1T6 521 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 WDR24Q96S15 920 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
PDE1C-202ENST00000396182 MAP3K9P80192 1104 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 PTPN21Q16825 1174 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
PDE1C-202ENST00000396182 CSF1RP07333 972 aa18.44■□□□□ 0.54
PDE1C-202ENST00000396182 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
PDE1C-202ENST00000396182 KRBA2Q6ZNG9 492 aa18.44■□□□□ 0.54
PDE1C-202ENST00000396182 RSRC2Q7L4I2 434 aaKnown RBP18.44■□□□□ 0.54
PDE1C-202ENST00000396182 TBC1D10CQ8IV04 446 aa18.44■□□□□ 0.54
PDE1C-202ENST00000396182 FAM177A1Q8N128 213 aaPredicted RBP18.44■□□□□ 0.54
PDE1C-202ENST00000396182 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
PDE1C-202ENST00000396182 MRFAP1Q9Y605 127 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms