RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 RGS19P49795 217 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 FAM83AQ86UY5 434 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 MCOLN1Q9GZU1 580 aa16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 CCDC8Q9H0W5 538 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
HLA-DMA-202ENST00000395303 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 AACSQ86V21 672 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 ABCF2Q9UG63 623 aa16.37■□□□□ 0.21
HLA-DMA-202ENST00000395303 TCP10L2B9ZVM9 353 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 TNNI2P48788 182 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 SUPT20HL1Q3ZLR7 823 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 LDLRAD1Q5T700 205 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 ARMC9Q7Z3E5 817 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
HLA-DMA-202ENST00000395303 UNCXA6NJT0 531 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 SLC10A3P09131 477 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 MECOMQ03112 1051 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 MOB2Q70IA6 237 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 CCDC102AQ96A19 550 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 MROH7-TTC4A0A0A0MT08 1334 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 RFX7Q2KHR2 1363 aa16.35■□□□□ 0.21
HLA-DMA-202ENST00000395303 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 UBE2Q2LH0YL09 131 aa16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 ZAP70P43403 619 aa16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 AAMPQ13685 434 aa16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
HLA-DMA-202ENST00000395303 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 USP2O75604 605 aaPredicted RBP16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 LDHCP07864 332 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 CACNB3P54284 484 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 GSTO1P78417 241 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 MLLT1Q03111 559 aaPredicted RBP16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 DGKZQ13574 1117 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 RASAL3Q86YV0 1011 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 SAGE1Q9NXZ1 904 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 MYH1P12882 1939 aa16.33■□□□□ 0.2
HLA-DMA-202ENST00000395303 APBB1O00213 710 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 RHBDL3P58872 404 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 CDAN1Q8IWY9 1227 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 LRP2BPQ9P2M1 347 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
HLA-DMA-202ENST00000395303 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 IFIT2P09913 472 aaKnown RBP16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 BTDP43251 543 aa16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 TMED8Q6PL24 325 aaPredicted RBP16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 RAI14Q9P0K7 980 aa16.31■□□□□ 0.2
HLA-DMA-202ENST00000395303 ENTPD3O75355 529 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 IREB2P48200 963 aaKnown RBP16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 NFIAQ12857 509 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 PRKG1Q13976 671 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
HLA-DMA-202ENST00000395303 SLC34A2O95436 690 aa16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 ATP5JP18859 108 aa16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 PPP4CP60510 307 aa16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 ATAD5Q96QE3 1844 aa16.29■□□□□ 0.2
HLA-DMA-202ENST00000395303 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 TRPA1O75762 1119 aa16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 RGS3P49796 1198 aa16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.2
HLA-DMA-202ENST00000395303 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms