RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 CARMIL3Q8ND23 1372 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 EYA2O00167 538 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 ITGA6P23229 1130 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
RTN1-203ENST00000395090 SF3B3Q15393 1217 aaKnown RBP13.99□□□□□ -0.17
RTN1-203ENST00000395090 SH3BP5LQ7L8J4 393 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
RTN1-203ENST00000395090 OCSTAMPQ9BR26 566 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 SIL1Q9H173 461 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 IL1RAPL2Q9NP60 686 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
RTN1-203ENST00000395090 PNPLA7Q6ZV29 1317 aa13.98□□□□□ -0.17
RTN1-203ENST00000395090 ANKRD18BA2A2Z9 1011 aa13.98□□□□□ -0.17
RTN1-203ENST00000395090 PDE1AP54750 535 aa13.98□□□□□ -0.17
RTN1-203ENST00000395090 BMP2KLQ5H9B9 411 aa13.98□□□□□ -0.17
RTN1-203ENST00000395090 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
RTN1-203ENST00000395090 CLASRPQ8N2M8 674 aaKnown RBP13.98□□□□□ -0.17
RTN1-203ENST00000395090 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 LINC01559Q495D7 138 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 CCDC152Q4G0S7 254 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 PPP1R18Q6NYC8 613 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 ZNF592Q92610 1267 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 ZNF594Q96JF6 807 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 MYH3P11055 1940 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 MX1P20591 662 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 GTF2E1P29083 439 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 ZNF511Q8NB15 262 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
RTN1-203ENST00000395090 BACH2Q9BYV9 841 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 GPR108Q9NPR9 543 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 STK32BQ9NY57 414 aa13.97□□□□□ -0.17
RTN1-203ENST00000395090 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.17
RTN1-203ENST00000395090 SERPINB2P05120 415 aa13.96□□□□□ -0.17
RTN1-203ENST00000395090 TFCP2Q12800 502 aa13.96□□□□□ -0.17
RTN1-203ENST00000395090 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
RTN1-203ENST00000395090 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
RTN1-203ENST00000395090 ADAM32Q8TC27 787 aa13.96□□□□□ -0.17
RTN1-203ENST00000395090 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
RTN1-203ENST00000395090 PUS3Q9BZE2 481 aaKnown RBP13.96□□□□□ -0.17
RTN1-203ENST00000395090 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
RTN1-203ENST00000395090 AOX1Q06278 1338 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
RTN1-203ENST00000395090 DDR1Q08345 913 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 BPHLQ86WA6 291 aaPredicted RBP13.95□□□□□ -0.18
RTN1-203ENST00000395090 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 LAMB2P55268 1798 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 ABCC12Q96J65 1359 aa13.95□□□□□ -0.18
RTN1-203ENST00000395090 AGERQ15109 404 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 UCN2Q96RP3 112 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 RIC1Q4ADV7 1423 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 TUBGCP6Q96RT7 1819 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
RTN1-203ENST00000395090 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
RTN1-203ENST00000395090 MCCD1P59942 119 aaPredicted RBP13.93□□□□□ -0.18
RTN1-203ENST00000395090 TNNI3KQ59H18 835 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 TAF7LQ5H9L4 462 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 PLA2G2CQ5R387 149 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 AACSQ86V21 672 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 SEC31BQ9NQW1 1179 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 FPGT-TNNI3KV9GXZ4 949 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
RTN1-203ENST00000395090 IFIT2P09913 472 aaKnown RBP13.93□□□□□ -0.18
RTN1-203ENST00000395090 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 BCL11AQ9H165 835 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
RTN1-203ENST00000395090 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
RTN1-203ENST00000395090 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
RTN1-203ENST00000395090 QSER1Q2KHR3 1735 aa13.92□□□□□ -0.18
RTN1-203ENST00000395090 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
RTN1-203ENST00000395090 TRIM32Q13049 653 aa13.91□□□□□ -0.18
RTN1-203ENST00000395090 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
RTN1-203ENST00000395090 AKAP2Q9Y2D5 859 aa13.91□□□□□ -0.18
RTN1-203ENST00000395090 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
RTN1-203ENST00000395090 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
RTN1-203ENST00000395090 SH3BP2P78314 561 aa13.9□□□□□ -0.18
RTN1-203ENST00000395090 ST5P78524 1137 aa13.9□□□□□ -0.18
RTN1-203ENST00000395090 CRY2Q49AN0 593 aa13.9□□□□□ -0.18
RTN1-203ENST00000395090 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
RTN1-203ENST00000395090 CCDC8Q9H0W5 538 aaPredicted RBP13.9□□□□□ -0.18
RTN1-203ENST00000395090 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
RTN1-203ENST00000395090 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
RTN1-203ENST00000395090 DBNLQ9UJU6 430 aaKnown RBP13.9□□□□□ -0.18
RTN1-203ENST00000395090 ERC2O15083 957 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 NPHP1O15259 732 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 GLRX3O76003 335 aaKnown RBP13.9□□□□□ -0.19
RTN1-203ENST00000395090 PDE8BO95263 885 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms