RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 TOB2Q14106 344 aaPredicted RBP20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 ILDR2Q71H61 639 aa20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 ZSCAN31Q96LW9 406 aaPredicted RBP20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 INCENPQ9NQS7 918 aa20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 E7EWF7 191 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 COA1Q9GZY4 146 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 ZBTB22O15209 634 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 AOC3Q16853 763 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 NECAB1Q8N987 351 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.15■□□□□ 0.82
SLC6A4-202ENST00000394821 KRT32Q14532 448 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 CHST3Q7LGC8 479 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 CERS5Q8N5B7 392 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 NEK1Q96PY6 1258 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 TACC3Q9Y6A5 838 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 MAST2Q6P0Q8 1798 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 RTFDC1Q9BY42 306 aaPredicted RBP20.14■□□□□ 0.81
SLC6A4-202ENST00000394821 EVX2Q03828 476 aa20.13■□□□□ 0.81
SLC6A4-202ENST00000394821 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
SLC6A4-202ENST00000394821 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
SLC6A4-202ENST00000394821 F8W031 263 aaPredicted RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 PRPF40AO75400 957 aaKnown RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 TBC1D10CQ8IV04 446 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 SMC3Q9UQE7 1217 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 BAZ2AQ9UIF9 1905 aaKnown RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 MYH2Q9UKX2 1941 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 ZNF213O14771 459 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 SYT1P21579 422 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 SPTY2D1Q68D10 685 aaPredicted RBP20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 EYA3Q99504 573 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 CTNNA3Q9UI47 895 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
SLC6A4-202ENST00000394821 G3V3G9 751 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 CTDSPL2Q05D32 466 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 ANKRD1Q15327 319 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 DCAF8Q5TAQ9 597 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 CYP2D7A0A087X1C5 515 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 GJB2P29033 226 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 NAPBQ9H115 298 aa20.11■□□□□ 0.81
SLC6A4-202ENST00000394821 ECE2O60344 883 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 TGFB2P61812 414 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 COL4A5P29400 1685 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 STX6O43752 255 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 ALX1Q15699 326 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 ZNF277Q9NRM2 450 aaPredicted RBP20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
SLC6A4-202ENST00000394821 BRCA1P38398 1863 aaKnown RBP20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 ADAMTSL1Q8N6G6 1762 aa20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 TDO2P48775 406 aa20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 GPT2Q8TD30 523 aa20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 SH3RF3Q8TEJ3 882 aaPredicted RBP20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 GPHNQ9NQX3 736 aaPredicted RBP20.09■□□□□ 0.81
SLC6A4-202ENST00000394821 ZSCAN22P10073 491 aaPredicted RBP20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 FOXD4L6Q3SYB3 417 aaPredicted RBP20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 CCDC93Q567U6 631 aa20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 FOXD4L3Q6VB84 417 aaPredicted RBP20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 Q6ZUG5 572 aa20.08■□□□□ 0.81
SLC6A4-202ENST00000394821 ZNF646O15015 1829 aaPredicted RBP20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 YDJCA8MPS7 323 aa20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 PPIP5K2O43314 1243 aa20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 GNAT2P19087 354 aa20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.8
SLC6A4-202ENST00000394821 EXOSC10Q01780 885 aaKnown RBP20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 NEDD4P46934 1319 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 MINDY4BA8MYZ0 360 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 SCNN1DP51172 638 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 CC2D2BQ6DHV5 1058 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
SLC6A4-202ENST00000394821 MROH7-TTC4A0A0A0MT08 1334 aa20.06■□□□□ 0.8
SLC6A4-202ENST00000394821 DHX32Q7L7V1 743 aaKnown RBP20.06■□□□□ 0.8
SLC6A4-202ENST00000394821 TBC1D22AQ8WUA7 517 aa20.06■□□□□ 0.8
SLC6A4-202ENST00000394821 PCDHAC2Q9Y5I4 1007 aa20.06■□□□□ 0.8
SLC6A4-202ENST00000394821 CYP2D6P10635 497 aa20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 BTDP43251 543 aa20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 ANTXR2P58335 489 aa20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 STK3Q13188 491 aa20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 DALRD3Q5D0E6 543 aaKnown RBP20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 MB21D2Q8IYB1 491 aaPredicted RBP20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 DCP1AQ9NPI6 582 aaPredicted RBP20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 MTMR6Q9Y217 621 aa20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 L1TD1Q5T7N2 865 aaKnown RBP20.05■□□□□ 0.8
SLC6A4-202ENST00000394821 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms