RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 USPL1Q5W0Q7 1092 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 CIAO1O76071 339 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 SLC4A4Q9Y6R1 1079 aa13.36□□□□□ -0.27
UBE2D3-209ENST00000394804 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 PHKBQ93100 1093 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 BMP15O95972 392 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 ITGA6P23229 1130 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 DPCR1Q3MIW9 517 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 TRIM75PA6NK02 468 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 ARFGAP3Q9NP61 516 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 UTYO14607 1347 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 BAG1Q99933 345 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 PUS3Q9BZE2 481 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-209ENST00000394804 AFMP43652 599 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 ESR2Q92731 530 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 M0R2C6 588 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 MBD4O95243 580 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 CCDC175P0C221 793 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 GNAT2P19087 354 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 DMTNQ08495 405 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 DHX58Q96C10 678 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
UBE2D3-209ENST00000394804 POTEB2H3BUK9 544 aa13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 H7C1W4 665 aa13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 ARHGAP6O43182 974 aa13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 MYO1BO43795 1136 aa13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.27
UBE2D3-209ENST00000394804 ZMYM6O95789 1325 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 ATG3Q9NT62 314 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 ADORA1P30542 326 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 NLRP5P59047 1200 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 NCBP1Q09161 790 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 ARID5BQ14865 1188 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 UTP14CQ5TAP6 766 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
UBE2D3-209ENST00000394804 N4BP3O15049 544 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 C8orf37Q96NL8 207 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 ZNF609O15014 1411 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 CYP7A1P22680 504 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 EIF5P55010 431 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 EVCP57679 992 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 PNOCQ13519 176 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 CCDC148Q8NFR7 591 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 ZNF532Q9HCE3 1301 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 NFE2L3Q9Y4A8 694 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 TULP1O00294 542 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 KIF23Q02241 960 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 NOM1Q5C9Z4 860 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 CARD6Q9BX69 1037 aa13.32□□□□□ -0.28
UBE2D3-209ENST00000394804 TNS3Q68CZ2 1445 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 POLR2DO15514 142 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 DEXIO95424 95 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 IKBKBO14920 756 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 SPAG1Q07617 926 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 ERCC6LQ2NKX8 1250 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms