RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 CEP57L1Q8IYX8 460 aa19.36■□□□□ 0.69
PRDM5-202ENST00000394435 CACTINQ8WUQ7 758 aaKnown RBP19.36■□□□□ 0.69
PRDM5-202ENST00000394435 MYL10Q9BUA6 226 aa19.36■□□□□ 0.69
PRDM5-202ENST00000394435 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
PRDM5-202ENST00000394435 ARAP2Q8WZ64 1704 aa19.36■□□□□ 0.69
PRDM5-202ENST00000394435 PATL2C9JE40 543 aaKnown RBP19.35■□□□□ 0.69
PRDM5-202ENST00000394435 IFNL3Q8IZI9 196 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 AOPEPQ8N6M6 819 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 TMEM87BQ96K49 555 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 PLCH1Q4KWH8 1693 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 KDM4FA0A1W2PPD8 638 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 MAP3K12Q12852 859 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 ALX1Q15699 326 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 AK7Q96M32 723 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 UTP14AQ9BVJ6 771 aaKnown RBP19.35■□□□□ 0.69
PRDM5-202ENST00000394435 NAPBQ9H115 298 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 LY9Q9HBG7 655 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
PRDM5-202ENST00000394435 ZBTB43O43298 467 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 CDKL5O76039 1030 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 TMEM67Q5HYA8 995 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 KRT40Q6A162 431 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 ACSBG1Q96GR2 724 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 CCDC87Q9NVE4 849 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 MARCKSP29966 332 aaPredicted RBP19.34■□□□□ 0.69
PRDM5-202ENST00000394435 AXDND1Q5T1B0 1012 aaPredicted RBP19.34■□□□□ 0.69
PRDM5-202ENST00000394435 MRFAP1L1Q96HT8 127 aa19.34■□□□□ 0.69
PRDM5-202ENST00000394435 GOLGA8AA7E2F4 631 aa19.33■□□□□ 0.69
PRDM5-202ENST00000394435 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.69
PRDM5-202ENST00000394435 ATP6V1AP38606 617 aa19.33■□□□□ 0.69
PRDM5-202ENST00000394435 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.69
PRDM5-202ENST00000394435 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.69
PRDM5-202ENST00000394435 VPS37DQ86XT2 251 aa19.33■□□□□ 0.69
PRDM5-202ENST00000394435 KIAA1468Q9P260 1216 aa19.33■□□□□ 0.69
PRDM5-202ENST00000394435 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.69
PRDM5-202ENST00000394435 PRKAB2O43741 272 aa19.33■□□□□ 0.68
PRDM5-202ENST00000394435 ZNF202O95125 648 aa19.33■□□□□ 0.68
PRDM5-202ENST00000394435 GTF2F1P35269 517 aaKnown RBP eCLIP19.33■□□□□ 0.68
PRDM5-202ENST00000394435 BCAMP50895 628 aa19.33■□□□□ 0.68
PRDM5-202ENST00000394435 ARID5BQ14865 1188 aa19.33■□□□□ 0.68
PRDM5-202ENST00000394435 NAT10Q9H0A0 1025 aaKnown RBP19.33■□□□□ 0.68
PRDM5-202ENST00000394435 FAM217BQ9NTX9 383 aaPredicted RBP19.33■□□□□ 0.68
PRDM5-202ENST00000394435 ZSWIM5Q9P217 1185 aa19.33■□□□□ 0.68
PRDM5-202ENST00000394435 RANBP6O60518 1105 aaKnown RBP19.32■□□□□ 0.68
PRDM5-202ENST00000394435 PFKFB1P16118 471 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 SLC39A14Q15043 492 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 NTRK3Q16288 839 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 DPCR1Q3MIW9 517 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 WNK3Q9BYP7 1800 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 GSG1L2A8MUP6 293 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 UBE2Q2LH0YL09 131 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 IFIT3O14879 490 aaKnown RBP19.32■□□□□ 0.68
PRDM5-202ENST00000394435 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
PRDM5-202ENST00000394435 GNL2Q13823 731 aaKnown RBP19.32■□□□□ 0.68
PRDM5-202ENST00000394435 MAP7D2Q96T17 732 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 MROH7-TTC4A0A0A0MT08 1334 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 DOCK2Q92608 1830 aa19.32■□□□□ 0.68
PRDM5-202ENST00000394435 BIN1O00499 593 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 CAMTA2O94983 1202 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 CMA1P23946 247 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 CHAF1AQ13111 956 aaPredicted RBP19.31■□□□□ 0.68
PRDM5-202ENST00000394435 SGMS1Q86VZ5 419 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 RIOK3O14730 519 aaKnown RBP19.31■□□□□ 0.68
PRDM5-202ENST00000394435 SLC3A2P08195 630 aaKnown RBP19.31■□□□□ 0.68
PRDM5-202ENST00000394435 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
PRDM5-202ENST00000394435 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 LCORLQ8N3X6 602 aa19.31■□□□□ 0.68
PRDM5-202ENST00000394435 CCDC152Q4G0S7 254 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 RRP12Q5JTH9 1297 aaKnown RBP19.3■□□□□ 0.68
PRDM5-202ENST00000394435 LRRC8AQ8IWT6 810 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 RGS22Q8NE09 1264 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 SLC12A7Q9Y666 1083 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 CHD4Q14839 1912 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 IGHMBP2P38935 993 aaKnown RBP19.3■□□□□ 0.68
PRDM5-202ENST00000394435 ITPK1Q13572 414 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 AKNAD1Q5T1N1 836 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 C16orf45Q96MC5 204 aaPredicted RBP19.3■□□□□ 0.68
PRDM5-202ENST00000394435 SLC26A6Q9BXS9 759 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 NIP7Q9Y221 180 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRDM5-202ENST00000394435 SLC4A4Q9Y6R1 1079 aa19.3■□□□□ 0.68
PRDM5-202ENST00000394435 CCDC69A6NI79 296 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 DDB1Q16531 1140 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 MFSD6Q6ZSS7 791 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 MIGA1Q8NAN2 632 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 ZKSCAN3Q9BRR0 538 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 TOMM22Q9NS69 142 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 LIFRP42702 1097 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 TDO2P48775 406 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 SIK1P57059 783 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 TRIM29Q14134 588 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 PHLPP1O60346 1717 aa19.29■□□□□ 0.68
PRDM5-202ENST00000394435 NTSR2O95665 410 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 NLRP12P59046 1061 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 SSRP1Q08945 709 aaKnown RBP19.28■□□□□ 0.68
PRDM5-202ENST00000394435 PTPAQ15257 358 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 ZNF710Q8N1W2 664 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms