RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	PC	P11498	1178 aa	Known RBP	10.84	□□□□□ -0.67
MITF-205	ENST00000394348	RFC4	P35249	363 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	BCAM	P50895	628 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	RCAN1	P53805	252 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	APOBR	Q0VD83	1088 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	REST	Q13127	1097 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	STK3	Q13188	491 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	GIMAP6	Q6P9H5	292 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	SRP68	Q9UHB9	627 aa	Known RBP	10.84	□□□□□ -0.67
MITF-205	ENST00000394348	COL1A1	P02452	1464 aa	Predicted RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348		A0A0G2JLW4	131 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	PTPDC1	A2A3K4	754 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348		H3BQV1	296 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	JAK2	O60674	1132 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	ANTXR2	P58335	489 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	DNM1	Q05193	864 aa	Known RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348	IFFO2	Q5TF58	517 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	C15orf52	Q6ZUT6	534 aa	Known RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348	SGMS1	Q86VZ5	419 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	IFNL3	Q8IZI9	196 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	STAG1	Q8WVM7	1258 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	CELF1	Q92879	486 aa	Known RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348	LRRC2	Q9BYS8	371 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	KRT23	Q9C075	422 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	NBPF3	Q9H094	633 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	NAPB	Q9H115	298 aa		10.83	□□□□□ -0.68
MITF-205	ENST00000394348	RNF41	Q9H4P4	317 aa	Predicted RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348	ANGEL1	Q9UNK9	670 aa	Known RBP	10.83	□□□□□ -0.68
MITF-205	ENST00000394348	GSG1L2	A8MUP6	293 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	SH2B2	O14492	632 aa	Predicted RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	FIBP	O43427	364 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	CDKL5	O76039	1030 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	CTDNEP1	O95476	244 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	TM4SF1	P30408	202 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	LIFR	P42702	1097 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	NASP	P49321	788 aa	Predicted RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	HAND2	P61296	217 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	CCDC173	Q0VFZ6	552 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	GRAP	Q13588	217 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	BICDL1	Q6ZP65	573 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	TBC1D10C	Q8IV04	446 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	GRAPL	Q8TC17	118 aa	Predicted RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	ANP32B	Q92688	251 aa	Known RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	FAM84B	Q96KN1	310 aa	Predicted RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.82	□□□□□ -0.68
MITF-205	ENST00000394348	LRP2BP	Q9P2M1	347 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	ANAPC4	Q9UJX5	808 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	CFAP45	Q9UL16	551 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	BRPF3	Q9ULD4	1205 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	LEMD3	Q9Y2U8	911 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	IRS2	Q9Y4H2	1338 aa		10.82	□□□□□ -0.68
MITF-205	ENST00000394348	BRWD3	Q6RI45	1802 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	KLF18	A0A0U1RQI7	1052 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	GOLGA8B	A8MQT2	603 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	GADD45B	O75293	160 aa	Predicted RBP	10.81	□□□□□ -0.68
MITF-205	ENST00000394348	APP	P05067	770 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	KCNQ4	P56696	695 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	AKNAD1	Q5T1N1	836 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	CPLX2	Q6PUV4	134 aa	Known RBP	10.81	□□□□□ -0.68
MITF-205	ENST00000394348	VPS37D	Q86XT2	251 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	CNBD1	Q8NA66	436 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	CHAMP1	Q96JM3	812 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	BRIP1	Q9BX63	1249 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	QTRT2	Q9H974	415 aa	Known RBP	10.81	□□□□□ -0.68
MITF-205	ENST00000394348	RBM27	Q9P2N5	1060 aa	Known RBP	10.81	□□□□□ -0.68
MITF-205	ENST00000394348	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.81	□□□□□ -0.68
MITF-205	ENST00000394348	HPS5	Q9UPZ3	1129 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	TAF1	P21675	1872 aa		10.81	□□□□□ -0.68
MITF-205	ENST00000394348	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	MAGEB6P1	A0A0J9YX57	407 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	SNAP23	O00161	211 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	CYP7A1	P22680	504 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	HIBADH	P31937	336 aa	Known RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	GYG1	P46976	350 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	NFIX	Q14938	502 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	SART3	Q15020	963 aa	Known RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	CRY2	Q49AN0	593 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	IER5L	Q5T953	404 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	LHX8	Q68G74	356 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	KRT27	Q7Z3Y8	459 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	TMC4	Q7Z404	712 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	TTC6	Q86TZ1	520 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	TMTC2	Q8N394	836 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	LCORL	Q8N3X6	602 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	ZFP91	Q96JP5	570 aa	Predicted RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	ZNF396	Q96N95	335 aa	Predicted RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	PPP1R9B	Q96SB3	815 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	TSPY26P	Q9H489	355 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	ARMT1	Q9H993	441 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	GDPD2	Q9HCC8	539 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	SLC4A4	Q9Y6R1	1079 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	LRRC37A	A6NMS7	1700 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	CCDC88A	Q3V6T2	1871 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	STK36	Q9NRP7	1315 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.8	□□□□□ -0.68
MITF-205	ENST00000394348	LAMB1	P07942	1786 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	RGPD4	Q7Z3J3	1758 aa		10.8	□□□□□ -0.68
MITF-205	ENST00000394348	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.79	□□□□□ -0.68
MITF-205	ENST00000394348	SYCE3	A1L190	88 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms