RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MAGEB6Q8N7X4 407 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 KCNG4Q8TDN1 519 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
SMAD1-202ENST00000394092 RNF41Q9H4P4 317 aaPredicted RBP8.39□□□□□ -1.07
SMAD1-202ENST00000394092 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 MRVI1Q9Y6F6 885 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 CNTNAP4Q9C0A0 1308 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 BTAF1O14981 1849 aa8.39□□□□□ -1.07
SMAD1-202ENST00000394092 LAMB1P07942 1786 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-202ENST00000394092 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NR1I2O75469 434 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 MBD4O95243 580 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 ADD1P35611 737 aaKnown RBP8.38□□□□□ -1.07
SMAD1-202ENST00000394092 LIFRP42702 1097 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 ME1P48163 572 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 FOSBP53539 338 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 FAM160A1Q05DH4 1040 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 CHRNDQ07001 517 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 CAMK4Q16566 473 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 STX1AQ16623 288 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 SYNE3Q6ZMZ3 975 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 SGMS1Q86VZ5 419 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 TBC1D10CQ8IV04 446 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-202ENST00000394092 IFNL3Q8IZI9 196 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 FBXO18Q8NFZ0 1043 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
SMAD1-202ENST00000394092 WASF1Q92558 559 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 USP28Q96RU2 1077 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NYXQ9GZU5 481 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 STK36Q9NRP7 1315 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 NID2Q14112 1375 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
SMAD1-202ENST00000394092 A0A1W2PQ27 194 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 A0A1W2PQ64 194 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ERICH2A1L162 156 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ZBTB43O43298 467 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 FDPSP14324 419 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TDO2P48775 406 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 RCAN1P53805 252 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TRIM29Q14134 588 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 STK38Q15208 465 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 SF3B3Q15393 1217 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ANO6Q4KMQ2 910 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 NFXL1Q6ZNB6 911 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 CCAR1Q8IX12 1150 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 CKAP2LQ8IYA6 745 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 MRPS27Q92552 414 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 LRP2BPQ9P2M1 347 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 THSD7AQ9UPZ6 1657 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 DLEC1Q9Y238 1755 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 CCDC69A6NI79 296 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 GOLGA8AA7E2F4 631 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 B4E1Z4 1266 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 SEMA3EO15041 775 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 GUCY1B3Q02153 619 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 VPS72Q15906 364 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 CAVIN4Q5BKX8 364 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ADALQ6DHV7 355 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TMED8Q6PL24 325 aaPredicted RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 MFSD6Q6ZSS7 791 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 FSIP1Q8NA03 581 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
SMAD1-202ENST00000394092 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD1-202ENST00000394092 ZNF804BA4D1E1 1349 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 NEDD4P46934 1319 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 CACNA1SQ13698 1873 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 LY75O60449 1722 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 GOLGA6L19H0YKK7 550 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 IFIT3O14879 490 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 ZNF165P49910 485 aa8.36□□□□□ -1.07
SMAD1-202ENST00000394092 KIF23Q02241 960 aaPredicted RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 ZRSR1Q15695 479 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
SMAD1-202ENST00000394092 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms