RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 TDO2P48775 406 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
CDH16-202ENST00000394055 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 TAF1P21675 1872 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 FAM182BQ5T319 152 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 ERCC4Q92889 916 aaPredicted RBP17.13■□□□□ 0.33
CDH16-202ENST00000394055 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
CDH16-202ENST00000394055 ZKSCAN3Q9BRR0 538 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 ZSWIM5Q9P217 1185 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 RREB1Q92766 1687 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 STK38Q15208 465 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 IGDCC4Q8TDY8 1250 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
CDH16-202ENST00000394055 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 ADGRA1Q86SQ6 560 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 C17orf53Q8N3J3 647 aaPredicted RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 LY9Q9HBG7 655 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 ZBTB43O43298 467 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 KINO60870 393 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 CYP7A1P22680 504 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 ZNF165P49910 485 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 ALX1Q15699 326 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 TBC1D9BQ66K14 1250 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 RTEL1Q9NZ71 1219 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
CDH16-202ENST00000394055 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
CDH16-202ENST00000394055 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
CDH16-202ENST00000394055 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
CDH16-202ENST00000394055 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 FAM160A1Q05DH4 1040 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 MFSD6Q6ZSS7 791 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 LINC00301Q8NCQ3 95 aa17.1■□□□□ 0.33
CDH16-202ENST00000394055 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 NACAP1Q9BZK3 213 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 BCL9LQ86UU0 1499 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 TOM1O60784 492 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 SYNE3Q6ZMZ3 975 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
CDH16-202ENST00000394055 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
CDH16-202ENST00000394055 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.33
CDH16-202ENST00000394055 CCDC69A6NI79 296 aa17.08■□□□□ 0.33
CDH16-202ENST00000394055 RANBP6O60518 1105 aaKnown RBP17.08■□□□□ 0.33
CDH16-202ENST00000394055 VPS37DQ86XT2 251 aa17.08■□□□□ 0.33
CDH16-202ENST00000394055 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.33
CDH16-202ENST00000394055 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.33
CDH16-202ENST00000394055 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
CDH16-202ENST00000394055 KRT40Q6A162 431 aa17.08■□□□□ 0.32
CDH16-202ENST00000394055 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
CDH16-202ENST00000394055 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
CDH16-202ENST00000394055 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.32
CDH16-202ENST00000394055 LAMB2P55268 1798 aa17.08■□□□□ 0.32
CDH16-202ENST00000394055 CDKL5O76039 1030 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 KLRK1P26718 216 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
CDH16-202ENST00000394055 NDUFA8P51970 172 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 CCDC82Q8N4S0 544 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
CDH16-202ENST00000394055 SPTLC2O15270 562 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
CDH16-202ENST00000394055 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
CDH16-202ENST00000394055 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
CDH16-202ENST00000394055 GNPATO15228 680 aa17.06■□□□□ 0.32
CDH16-202ENST00000394055 GNAT2P19087 354 aa17.06■□□□□ 0.32
CDH16-202ENST00000394055 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
CDH16-202ENST00000394055 NTRK3Q16288 839 aa17.06■□□□□ 0.32
CDH16-202ENST00000394055 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
CDH16-202ENST00000394055 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
CDH16-202ENST00000394055 CMTR1Q8N1G2 835 aaKnown RBP17.06■□□□□ 0.32
CDH16-202ENST00000394055 TRIM5Q9C035 493 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms