RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZNF384Q8TF68 577 aa23.12■■□□□ 1.29
PDLIM7-204ENST00000393546 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
PDLIM7-204ENST00000393546 ANTXR1Q9H6X2 564 aa23.12■■□□□ 1.29
PDLIM7-204ENST00000393546 GPR75-ASB3A0A0A6YYF3 556 aa23.11■■□□□ 1.29
PDLIM7-204ENST00000393546 BTDP43251 543 aa23.11■■□□□ 1.29
PDLIM7-204ENST00000393546 CACNB3P54284 484 aa23.11■■□□□ 1.29
PDLIM7-204ENST00000393546 MAP3K12Q12852 859 aa23.11■■□□□ 1.29
PDLIM7-204ENST00000393546 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
PDLIM7-204ENST00000393546 GOLIM4O00461 696 aa23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 FKBP1BP68106 108 aa23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 SAPCD2Q86UD0 394 aa23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 FAM83AQ86UY5 434 aa23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 HAUS7Q99871 368 aa23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 NOL10Q9BSC4 688 aaKnown RBP23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 MKRN1Q9UHC7 482 aaKnown RBP23.1■■□□□ 1.29
PDLIM7-204ENST00000393546 RASSF10A6NK89 507 aa23.09■■□□□ 1.29
PDLIM7-204ENST00000393546 TTLL12Q14166 644 aaPredicted RBP23.09■■□□□ 1.29
PDLIM7-204ENST00000393546 KLRG1Q96E93 195 aa23.09■■□□□ 1.29
PDLIM7-204ENST00000393546 PAG1Q9NWQ8 432 aa23.09■■□□□ 1.29
PDLIM7-204ENST00000393546 BAG3O95817 575 aa23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 MAP4K4O95819 1239 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 HUNKP57058 714 aa23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 NBPF12Q5TAG4 269 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 TMED8Q6PL24 325 aaPredicted RBP23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 TMEM39BQ9GZU3 492 aa23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 MYO5AQ9Y4I1 1855 aaKnown RBP23.08■■□□□ 1.29
PDLIM7-204ENST00000393546 CNTNAP1P78357 1384 aa23.07■■□□□ 1.28
PDLIM7-204ENST00000393546 CYP7A1P22680 504 aa23.07■■□□□ 1.28
PDLIM7-204ENST00000393546 FAM151AQ8WW52 585 aa23.07■■□□□ 1.28
PDLIM7-204ENST00000393546 HHIPL1Q96JK4 782 aa23.07■■□□□ 1.28
PDLIM7-204ENST00000393546 TTC41PQ6P2S7 1318 aa23.07■■□□□ 1.28
PDLIM7-204ENST00000393546 ERC2O15083 957 aa23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 PPP1R12BO60237 982 aaPredicted RBP23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 PAXIP1Q6ZW49 1069 aaPredicted RBP23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 ARMC9Q7Z3E5 817 aa23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 MAGEB6Q8N7X4 407 aa23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 EDC3Q96F86 508 aaKnown RBP23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 IDI2Q9BXS1 227 aa23.06■■□□□ 1.28
PDLIM7-204ENST00000393546 PLCG2P16885 1265 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 MX1P20591 662 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 PPP4CP60510 307 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 NFIAQ12857 509 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 PRKG1Q13976 671 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 OTUD7AQ8TE49 926 aaPredicted RBP23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 TEPSINQ96N21 525 aa23.05■■□□□ 1.28
PDLIM7-204ENST00000393546 UBE2Q2LH0YL09 131 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 ECE1P42892 770 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 RHBDL3P58872 404 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 TCP10Q12799 353 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 SLC9C2Q5TAH2 1124 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 TSHZ3Q63HK5 1081 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 HOOK2Q96ED9 719 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 LNPKQ9C0E8 428 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 AATFQ9NY61 560 aaKnown RBP eCLIP23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 FAM198AQ9UFP1 575 aa23.04■■□□□ 1.28
PDLIM7-204ENST00000393546 ENTPD3O75355 529 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 GLRX3O76003 335 aaKnown RBP23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 VEGFBP49765 207 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 RGS3P49796 1198 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 NUCB1Q02818 461 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 MOB2Q70IA6 237 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 ADGRA1Q86SQ6 560 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 CHD1LQ86WJ1 897 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.03■■□□□ 1.284e-11■■■□□ 18.5
PDLIM7-204ENST00000393546 ANGEL1Q9UNK9 670 aaKnown RBP23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 MAST2Q6P0Q8 1798 aa23.03■■□□□ 1.28
PDLIM7-204ENST00000393546 PAPPA2Q9BXP8 1791 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 WDHD1O75717 1129 aaPredicted RBP23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 CYP4F22Q6NT55 531 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 RGMBQ6NW40 437 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 CERS3Q8IU89 383 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 TEX11Q8IYF3 940 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 CAPNS2Q96L46 248 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 DOCK2Q92608 1830 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 CEP350Q5VT06 3117 aa23.02■■□□□ 1.28
PDLIM7-204ENST00000393546 NPM3O75607 178 aaKnown RBP23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 PDE6AP16499 860 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 ZNF157P51786 506 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 GRM1Q13255 1194 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 PICALMQ13492 652 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 ZSCAN25Q6NSZ9 544 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 CDAN1Q8IWY9 1227 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 SH3RF3Q8TEJ3 882 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 STAP2Q9UGK3 403 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 SALL3Q9BXA9 1300 aa23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 WDR33Q9C0J8 1336 aaKnown RBP23.01■■□□□ 1.27
PDLIM7-204ENST00000393546 AK9Q5TCS8 1911 aa23■■□□□ 1.27
PDLIM7-204ENST00000393546 USP2O75604 605 aaPredicted RBP23■■□□□ 1.27
PDLIM7-204ENST00000393546 IREB2P48200 963 aaKnown RBP23■■□□□ 1.27
PDLIM7-204ENST00000393546 MAP3K11Q16584 847 aa23■■□□□ 1.27
PDLIM7-204ENST00000393546 ZFPM1Q8IX07 1006 aa23■■□□□ 1.27
PDLIM7-204ENST00000393546 PI4K2BQ8TCG2 481 aa23■■□□□ 1.27
PDLIM7-204ENST00000393546 CCDC102AQ96A19 550 aa23■■□□□ 1.27
PDLIM7-204ENST00000393546 RPAP1Q9BWH6 1393 aaPredicted RBP23■■□□□ 1.27
PDLIM7-204ENST00000393546 PDE1AP54750 535 aa22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 DYNLL1P63167 89 aaKnown RBP22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 LDLRAD1Q5T700 205 aa22.99■■□□□ 1.27
PDLIM7-204ENST00000393546 ZSCAN29Q8IWY8 852 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms