RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZNF202O95125 648 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 HOXC9P31274 260 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 MXRA7P84157 204 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 DIS3L2Q8IYB7 885 aaKnown RBP14.77□□□□□ -0.05
LCA5-202ENST00000392959 NOC4LQ9BVI4 516 aaKnown RBP14.77□□□□□ -0.05
LCA5-202ENST00000392959 RASSF4Q9H2L5 321 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 SMIM23A6NLE4 172 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 CUTAO60888 179 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 GCP02774 474 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 PLCG2P16885 1265 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 PLCD1P51178 756 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 GSTA5Q7RTV2 222 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 APPBP2Q92624 585 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 IMPG2Q9BZV3 1241 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 ATP6V0A2Q9Y487 856 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 TMEM110-MUSTN1A8MSY1 372 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 TRAF5O00463 557 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 ST5P78524 1137 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 KLHDC4Q8TBB5 520 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 COMMD10Q9Y6G5 202 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 INSRP06213 1382 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 POLR2DO15514 142 aaKnown RBP14.76□□□□□ -0.05
LCA5-202ENST00000392959 EEF2P13639 858 aaKnown RBP14.76□□□□□ -0.05
LCA5-202ENST00000392959 GJC1P36383 396 aa14.76□□□□□ -0.05
LCA5-202ENST00000392959 RPL13P26373 211 aaKnown RBP14.75□□□□□ -0.05
LCA5-202ENST00000392959 CALCOCO2Q13137 446 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 KBTBD3Q8NAB2 608 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 ZNF622Q969S3 477 aaKnown RBP eCLIP14.75□□□□□ -0.05
LCA5-202ENST00000392959 NFE2L3Q9Y4A8 694 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 ITSN2Q9NZM3 1697 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 FERP16591 822 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 ZNF804AQ7Z570 1209 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 CTNND2Q9UQB3 1225 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 GABPB1Q06547 395 aaPredicted RBP14.75□□□□□ -0.05
LCA5-202ENST00000392959 LETM2Q2VYF4 491 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 IP6K1Q92551 441 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 TCHPQ9BT92 498 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 NCKAP5LQ9HCH0 1330 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 CYP26C1Q6V0L0 522 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 CCDC25Q86WR0 208 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 SREK1Q8WXA9 508 aaKnown RBP14.75□□□□□ -0.05
LCA5-202ENST00000392959 METTL22Q9BUU2 404 aaPredicted RBP14.75□□□□□ -0.05
LCA5-202ENST00000392959 SERPINA10Q9UK55 444 aa14.75□□□□□ -0.05
LCA5-202ENST00000392959 UHRF1BP1Q6BDS2 1440 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 TRAPPC8Q9Y2L5 1435 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 IL2RBP14784 551 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 NLRP12P59046 1061 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 SAMD15Q9P1V8 674 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 MTUS1Q9ULD2 1270 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 DTNBO60941 627 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 PDE4DQ08499 809 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 CCDC65Q8IXS2 484 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 AFAP1L1Q8TED9 768 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 SMC6Q96SB8 1091 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 GPAA1O43292 621 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 KRBA2Q6ZNG9 492 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 TMTC1Q8IUR5 882 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 FMNL3Q8IVF7 1028 aa14.74□□□□□ -0.05
LCA5-202ENST00000392959 KRT9P35527 623 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 C8orf74Q6P047 294 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 TPTE2Q6XPS3 522 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 CCDC50Q8IVM0 306 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 CCDC26Q8TAB7 109 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 FAM89AQ96GI7 184 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 MAPK8IP1Q9UQF2 711 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 ZNF790Q6PG37 636 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 SYNRGQ9UMZ2 1314 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 JAK2O60674 1132 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 TTLL12Q14166 644 aaPredicted RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 DCAF17Q5H9S7 520 aaPredicted RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 NDUFAB1O14561 156 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 USP19O94966 1318 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 LDHBP07195 334 aaKnown RBP14.73□□□□□ -0.05
LCA5-202ENST00000392959 KCNK9Q9NPC2 374 aa14.73□□□□□ -0.05
LCA5-202ENST00000392959 PPP1R7Q15435 360 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 SPATA24Q86W54 205 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 KRT40Q6A162 431 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 CABLES1Q8TDN4 633 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 PAK1Q13153 545 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 VWA3BQ502W6 1294 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
LCA5-202ENST00000392959 PIK3AP1Q6ZUJ8 805 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 B4GALNT4Q76KP1 1039 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 ZC3H12CQ9C0D7 883 aaKnown RBP14.71□□□□□ -0.05
LCA5-202ENST00000392959 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 PZPP20742 1482 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 PARP1P09874 1014 aaKnown RBP14.71□□□□□ -0.05
LCA5-202ENST00000392959 MRPL12P52815 198 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms