RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 FIBPO43427 364 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 ADCY5O95622 1261 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 CHAF1AQ13111 956 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 MTERF4Q7Z6M4 381 aaKnown RBP23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 ALDH8A1Q9H2A2 487 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-203ENST00000392334 FOXP2O15409 715 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 KDM4AO75164 1064 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 UBE3CQ15386 1083 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 STYK1Q6J9G0 422 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 DSCC1Q9BVC3 393 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 ATP6V0A2Q9Y487 856 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 KIF13BQ9NQT8 1826 aa23.36■■□□□ 1.33
CSNK1D-203ENST00000392334 UFL1O94874 794 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 DPEP1P16444 411 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 KCNA3P22001 575 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 PSMA5P28066 241 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 ME3Q16798 604 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 SP8Q8IXZ3 490 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 RAI14Q9P0K7 980 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 DENND2AQ9ULE3 1009 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 LEMD3Q9Y2U8 911 aa23.35■■□□□ 1.33
CSNK1D-203ENST00000392334 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
CSNK1D-203ENST00000392334 DNM1Q05193 864 aaKnown RBP23.34■■□□□ 1.33
CSNK1D-203ENST00000392334 MIGA1Q8NAN2 632 aa23.33■■□□□ 1.33
CSNK1D-203ENST00000392334 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.33
CSNK1D-203ENST00000392334 HAND2P61296 217 aa23.33■■□□□ 1.32
CSNK1D-203ENST00000392334 AIDAQ96BJ3 306 aa23.33■■□□□ 1.32
CSNK1D-203ENST00000392334 POLLQ9UGP5 575 aa23.33■■□□□ 1.32
CSNK1D-203ENST00000392334 ELP1O95163 1332 aa23.33■■□□□ 1.32
CSNK1D-203ENST00000392334 FGAP02671 866 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 APPP05067 770 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 GGA1Q9UJY5 639 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 ANKRD1Q15327 319 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 ADGRA1Q86SQ6 560 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 CNKSR1Q969H4 720 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 ARMT1Q9H993 441 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 SPTLC3Q9NUV7 552 aa23.32■■□□□ 1.32
CSNK1D-203ENST00000392334 C6orf229H3BNL8 230 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 MBD4O95243 580 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 PDCP20941 246 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 STOX1Q6ZVD7 989 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 TMC4Q7Z404 712 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 PRIMPOLQ96LW4 560 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 TPCN1Q9ULQ1 816 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 LTBP1Q14766 1721 aa23.31■■□□□ 1.32
CSNK1D-203ENST00000392334 CYP7A1P22680 504 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 RBM10P98175 930 aaKnown RBP23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 BLOC1S2Q6QNY1 142 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 TPM3P06753 285 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 NOLC1Q14978 699 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 TSGA10IPQ3SY00 556 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 GIMAP6Q6P9H5 292 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 MYRIPQ8NFW9 859 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 PODXL2Q9NZ53 605 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 MYH7P12883 1935 aa23.3■■□□□ 1.32
CSNK1D-203ENST00000392334 KRT85P78386 507 aa23.29■■□□□ 1.32
CSNK1D-203ENST00000392334 NEK1Q96PY6 1258 aa23.29■■□□□ 1.32
CSNK1D-203ENST00000392334 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-203ENST00000392334 ATP2B4P23634 1241 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 PRDX5P30044 214 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 LCORLQ8N3X6 602 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 C7orf43Q8WVR3 580 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 SPON1Q9HCB6 807 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 FAM13BQ9NYF5 915 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 VPS37CA5D8V6 355 aaPredicted RBP23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 PRKAB2O43741 272 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 C21orf2O43822 256 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 DTNBO60941 627 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 TGFB2P61812 414 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 LARP1BQ659C4 914 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 MPNDQ8N594 471 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 TTLL6Q8N841 843 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 ZNF384Q8TF68 577 aa23.28■■□□□ 1.32
CSNK1D-203ENST00000392334 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 SEMA3EO15041 775 aa23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 CCDC192P0DO97 292 aa23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 RPS6KB1P23443 525 aa23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 HMGN5P82970 282 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 LRRC2Q9BYS8 371 aa23.27■■□□□ 1.32
CSNK1D-203ENST00000392334 KRT32Q14532 448 aa23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 DPP8Q6V1X1 898 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 ZNF804AQ7Z570 1209 aa23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 NECAB1Q8N987 351 aa23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 E7EWF7 191 aa23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 GTF2F1P35269 517 aaKnown RBP eCLIP23.26■■□□□ 1.311e-7■■■■■ 37.7
CSNK1D-203ENST00000392334 TTC6Q86TZ1 520 aa23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 TMX4Q9H1E5 349 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-203ENST00000392334 MECOMQ03112 1051 aa23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 IMMTQ16891 758 aaKnown RBP23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 NAA16Q6N069 864 aaPredicted RBP23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 TTC12Q9H892 705 aaPredicted RBP23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 CTNNA3Q9UI47 895 aa23.25■■□□□ 1.31
CSNK1D-203ENST00000392334 TDRD7Q8NHU6 1098 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms