RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 EPHX2P34913 555 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 IL13P35225 146 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 CTCFP49711 727 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 MLLT1Q03111 559 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 TEFQ10587 303 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 AIMP1Q12904 312 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 COL9A3Q14050 684 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 ADGRE1Q14246 886 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 MBTPS1Q14703 1052 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 HLFQ16534 295 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 PTPRNQ16849 979 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 RTL5Q5HYW3 569 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 AKAP4Q5JQC9 854 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 CST9Q5W186 159 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 PRR5LQ6MZQ0 368 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 PRPF40BQ6NWY9 871 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 TPTE2Q6XPS3 522 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 MCM10Q7L590 875 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 VASH1Q7L8A9 365 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 SLC51AQ86UW1 340 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 NBPF5PQ86XG9 351 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 DZIP3Q86Y13 1208 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 NUTM1Q86Y26 1132 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 TTC5Q8N0Z6 440 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 JARID2Q92833 1246 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 CNKSR1Q969H4 720 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 ABHD8Q96I13 439 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 THUMPD2Q9BTF0 503 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 CFHR5Q9BXR6 569 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 NUCKS1Q9H1E3 243 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 TAF1DQ9H5J8 278 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 KCNQ5Q9NR82 932 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 SCAF8Q9UPN6 1271 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 NIP7Q9Y221 180 aaKnown RBP eCLIP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 LAS1LQ9Y4W2 734 aaKnown RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 ARIH1Q9Y4X5 557 aaPredicted RBP2.54□□□□□ -2
SNORA40.18-201ENST00000391200 FER1L6Q2WGJ9 1857 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 SCN11AQ9UI33 1791 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 C4AP0C0L4 1744 aa2.54□□□□□ -2
SNORA40.18-201ENST00000391200 FAM208AQ9UK61 1670 aaKnown RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ABCC6O95255 1503 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 NSD3Q9BZ95 1437 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 RNF123Q5XPI4 1314 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 SHTN1A0MZ66 631 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 DBX1A6NMT0 343 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 GNAT3A8MTJ3 354 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 H7C1W4 665 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 HOXA2O43364 376 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 TRPA1O75762 1119 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 RAD17O75943 681 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 U2AF1L5P0DN76 240 aaPredicted RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 SRGNP10124 158 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 SELPP16109 830 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ALDH1B1P30837 517 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 EIF5P55010 431 aaKnown RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 EIF6P56537 245 aaKnown RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 EIF4G2P78344 907 aaKnown RBP eCLIP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ST5P78524 1137 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 U2AF1Q01081 240 aaKnown RBP eCLIP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 DGKZQ13574 1117 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 NEUROD2Q15784 382 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 PRAMEF18Q5VWM3 479 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 CIAPIN1Q6FI81 312 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ZNF790Q6PG37 636 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 RETREG3Q86VR2 466 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 LARGE2Q8N3Y3 721 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 CNBD1Q8NA66 436 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 JDP2Q8WYK2 163 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 MASTLQ96GX5 879 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 CAPNS2Q96L46 248 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ZIC5Q96T25 663 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 BCL2L13Q9BXK5 485 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 TEX13AQ9BXU3 409 aaPredicted RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 TMX4Q9H1E5 349 aaPredicted RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 TAOK3Q9H2K8 898 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 AVENQ9NQS1 362 aaPredicted RBP2.53□□□□□ -2
SNORA40.18-201ENST00000391200 HACL1Q9UJ83 578 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ANKRD31Q8N7Z5 1873 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 PKD1L3Q7Z443 1732 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 KIAA1551Q9HCM1 1747 aa2.53□□□□□ -2
SNORA40.18-201ENST00000391200 ADCY9O60503 1353 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 SOS1Q07889 1333 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 CNTNAP4Q9C0A0 1308 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 ZNF541Q9H0D2 1346 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 COL5A3P25940 1745 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 C6orf229H3BNL8 230 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 CAMTA2O94983 1202 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 CELF2O95319 508 aaKnown RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 TBC1D8O95759 1140 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 MYCP01106 439 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 ANXA1P04083 346 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 HSPA8P11142 646 aaKnown RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 HCLS1P14317 486 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 CD46P15529 392 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 NPR1P16066 1061 aa2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 LMOD1P29536 600 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 ADD1P35611 737 aaKnown RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 IL6STP40189 918 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.18-201ENST00000391200 IARSP41252 1262 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms