RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ACSBG1Q96GR2 724 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 CEP44Q9C0F1 390 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 SRCIN1Q9C0H9 1055 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 LRRC4CQ9HCJ2 640 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 KRT82Q9NSB4 513 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 TMEM39AQ9NV64 488 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 BSDC1Q9NW68 430 aaPredicted RBP2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 DAGLAQ9Y4D2 1042 aa2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 COL17A1Q9UMD9 1497 aaPredicted RBP2.49□□□□□ -2.01
SNORD28B-201ENST00000390993 PRR19A6NJB7 356 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 TM4SF5O14894 197 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 F13BP05160 661 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 NFICP08651 508 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 GSTP1P09211 210 aaKnown RBP2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 SPINK2P20155 84 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 GSTT1P30711 240 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 ITGAEP38570 1179 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 MAPK8P45983 427 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 ID3Q02535 119 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 KCNA1Q09470 495 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 ALG1LQ6GMV1 187 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 CDPF1Q6NVV7 123 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 FBF1Q8TES7 1133 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 KCNB2Q92953 911 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 MISP3Q96FF7 219 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 BCL11AQ9H165 835 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 CBX8Q9HC52 389 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 ABCB6Q9NP58 842 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 PRKAG2Q9UGJ0 569 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 PCOLCE2Q9UKZ9 415 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 SPG7Q9UQ90 795 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 GNEQ9Y223 722 aaKnown RBP2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 SLC5A6Q9Y289 635 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 AKAP2Q9Y2D5 859 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 RNF114Q9Y508 228 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 ACTL7BQ9Y614 415 aa2.48□□□□□ -2.01
SNORD28B-201ENST00000390993 PNMA6FA0A0J9YX94 578 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 GPR182O15218 404 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 PRNPP04156 253 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 YBX3P16989 372 aaKnown RBP eCLIP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 TAL1P17542 331 aaPredicted RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 LIG1P18858 919 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 ARNTP27540 789 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 ZNF157P51786 506 aaPredicted RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 GRM2Q14416 872 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 OGFOD3Q6PK18 319 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 CDC37L1Q7L3B6 337 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 SULF2Q8IWU5 870 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 SMYD4Q8IYR2 804 aaPredicted RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 KCT2Q8NC54 265 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 EPS8L3Q8TE67 593 aaKnown RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 ASIC4Q96FT7 647 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 FRMD6Q96NE9 622 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 WDR18Q9BV38 432 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 BCO2Q9BYV7 579 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 ZC3H12CQ9C0D7 883 aaKnown RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 NRSN2Q9GZP1 204 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 SEMA6CQ9H3T2 930 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 ACSS3Q9H6R3 686 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 FAM105AQ9NUU6 356 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 GTF2IRD1Q9UHL9 959 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 PPM1HQ9ULR3 514 aa2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 OAS3Q9Y6K5 1087 aaKnown RBP2.47□□□□□ -2.01
SNORD28B-201ENST00000390993 TMPRSS2O15393 492 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 MED26O95402 600 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 DLGAP3O95886 979 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 JUNBP17275 347 aaPredicted RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 NME2P22392 152 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 HOXA10P31260 410 aaPredicted RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 ENOX2Q16206 610 aaKnown RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 KIF4BQ2VIQ3 1234 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 SCARA3Q6AZY7 606 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 ZNF765Q7L2R6 523 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 TMC7Q7Z402 723 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 TRIM56Q9BRZ2 755 aaKnown RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 GSX1Q9H4S2 264 aaPredicted RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 CCDC86Q9H6F5 360 aaKnown RBP2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 LGR6Q9HBX8 967 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 CRIM1Q9NZV1 1036 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 CCDC39Q9UFE4 941 aa2.46□□□□□ -2.02
SNORD28B-201ENST00000390993 TMEM265A0A087WTH1 108 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 FAM170BA6NMN3 283 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 TREHO43280 583 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 FAM87AP0C7U9 286 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 ERVK-24P63145 666 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 TTLL4Q14679 1199 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 PLCL1Q15111 1095 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 ECM1Q16610 540 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 IFI16Q16666 785 aaKnown RBP2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 MSMPQ1L6U9 139 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 MAP1SQ66K74 1059 aaPredicted RBP2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 LLGL2Q6P1M3 1020 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 NXPE4Q6UWF7 544 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 RNF214Q8ND24 703 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 NETO1Q8TDF5 533 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 ELMO3Q96BJ8 720 aa2.45□□□□□ -2.02
SNORD28B-201ENST00000390993 ASB16Q96NS5 453 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms