RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 TIMM10P62072 90 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 TCP10Q12799 353 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
TRAV4-201ENST00000390426 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 HOOK2Q96ED9 719 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 DENND2AQ9ULE3 1009 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 OTOFQ9HC10 1997 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 BCAR3O75815 825 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 INPP5BP32019 993 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 CAP1Q01518 475 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 SP3Q02447 781 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 NFIAQ12857 509 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 ERO1BQ86YB8 467 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 FRAT1Q92837 279 aaPredicted RBP13.29□□□□□ -0.28
TRAV4-201ENST00000390426 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
TRAV4-201ENST00000390426 SEMA3EO15041 775 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 IPO8O15397 1037 aaKnown RBP13.28□□□□□ -0.28
TRAV4-201ENST00000390426 TFCP2Q12800 502 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
TRAV4-201ENST00000390426 A0A1B0GUL7 405 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 IRF6O14896 467 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 CETPP11597 493 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 TRIM27P14373 513 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 PPIL2Q13356 520 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 RASGRF1Q13972 1273 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 ABCF2Q9UG63 623 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.29
TRAV4-201ENST00000390426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.27□□□□□ -0.29
TRAV4-201ENST00000390426 RPAP1Q9BWH6 1393 aaPredicted RBP13.27□□□□□ -0.29
TRAV4-201ENST00000390426 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 LAMB1P07942 1786 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 MTX1Q13505 466 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 AKAP2Q9Y2D5 859 aa13.26□□□□□ -0.29
TRAV4-201ENST00000390426 GNAI2P04899 355 aa13.25□□□□□ -0.29
TRAV4-201ENST00000390426 PPATQ06203 517 aa13.25□□□□□ -0.29
TRAV4-201ENST00000390426 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
TRAV4-201ENST00000390426 DZIP1Q86YF9 867 aaKnown RBP13.25□□□□□ -0.29
TRAV4-201ENST00000390426 ZGPATQ8N5A5 531 aaKnown RBP13.25□□□□□ -0.29
TRAV4-201ENST00000390426 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
TRAV4-201ENST00000390426 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
TRAV4-201ENST00000390426 GAKO14976 1311 aa13.24□□□□□ -0.29
TRAV4-201ENST00000390426 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
TRAV4-201ENST00000390426 ZBTB22O15209 634 aa13.24□□□□□ -0.29
TRAV4-201ENST00000390426 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
TRAV4-201ENST00000390426 RGS3P49796 1198 aa13.24□□□□□ -0.29
TRAV4-201ENST00000390426 SPTY2D1Q68D10 685 aaPredicted RBP13.24□□□□□ -0.29
TRAV4-201ENST00000390426 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
TRAV4-201ENST00000390426 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 TLR2O60603 784 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
TRAV4-201ENST00000390426 BTDP43251 543 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAV4-201ENST00000390426 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
TRAV4-201ENST00000390426 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 FAM163AQ96GL9 167 aaPredicted RBP13.23□□□□□ -0.29
TRAV4-201ENST00000390426 IDI2Q9BXS1 227 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 ARHGAP39Q9C0H5 1083 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
TRAV4-201ENST00000390426 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
TRAV4-201ENST00000390426 ENTPD3O75355 529 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 MECOMQ03112 1051 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 PICALMQ13492 652 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 NOL9Q5SY16 702 aaKnown RBP13.22□□□□□ -0.29
TRAV4-201ENST00000390426 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 MIER1Q8N108 512 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
TRAV4-201ENST00000390426 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
TRAV4-201ENST00000390426 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 PTCH2Q9Y6C5 1203 aa13.22□□□□□ -0.29
TRAV4-201ENST00000390426 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
TRAV4-201ENST00000390426 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
TRAV4-201ENST00000390426 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
TRAV4-201ENST00000390426 PDHXO00330 501 aa13.21□□□□□ -0.29
TRAV4-201ENST00000390426 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
TRAV4-201ENST00000390426 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms