RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 PPP4CP60510 307 aa11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 TAF1DQ9H5J8 278 aaPredicted RBP11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 RRAGCQ9HB90 399 aa11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 NMRK2Q9NPI5 230 aa11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
TRBV20-1-201ENST00000390394 PITPNM2Q9BZ72 1349 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 MAGEB6P1A0A0J9YX57 407 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 WNT10BO00744 389 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 BTDP43251 543 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 TBC1D10BQ4KMP7 808 aaPredicted RBP11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 FKBP1CQ5VVH2 108 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 APOBEC3FQ8IUX4 373 aaKnown RBP11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 DCPSQ96C86 337 aaKnown RBP11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 CRNKL1Q9BZJ0 848 aaKnown RBP11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
TRBV20-1-201ENST00000390394 RAD50Q92878 1312 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 CDC45O75419 566 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 GRIK5Q16478 980 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 EAPPQ56P03 285 aaPredicted RBP11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 ZMYM1Q5SVZ6 1142 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 APOBEC3HQ6NTF7 200 aaKnown RBP11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 ZBED3Q96IU2 234 aaPredicted RBP11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 PPP2R3BQ9Y5P8 575 aa11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
TRBV20-1-201ENST00000390394 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 HTRA3P83110 453 aa11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 SULF1Q8IWU6 871 aa11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 HOOK2Q96ED9 719 aa11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 NACAP1Q9BZK3 213 aa11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 AATFQ9NY61 560 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRBV20-1-201ENST00000390394 MYH2Q9UKX2 1941 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 POTECB2RU33 542 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 USP5P45974 858 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 KIAA1211Q6ZU35 1233 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 MIGA1Q8NAN2 632 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 TDRD3Q9H7E2 651 aaKnown RBP11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 VEZTQ9HBM0 779 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 ZNF70Q9UC06 446 aaPredicted RBP11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 MYH7P12883 1935 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
TRBV20-1-201ENST00000390394 GPAA1O43292 621 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 ENTPD3O75355 529 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 MBD4O95243 580 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 CHMLP26374 656 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 NMIQ13287 307 aaPredicted RBP11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 CDC37L1Q7L3B6 337 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 ATP8A2Q9NTI2 1148 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 PGAP2Q9UHJ9 254 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
TRBV20-1-201ENST00000390394 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 NF2P35240 595 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 ADGRA1Q86SQ6 560 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 RIOK1Q9BRS2 568 aaKnown RBP11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 SLC4A4Q9Y6R1 1079 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
TRBV20-1-201ENST00000390394 CLRN2A0PK11 232 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 PATL2C9JE40 543 aaKnown RBP11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 REC8O95072 547 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 APPP05067 770 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 HLA-DOAP06340 250 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 RHBDL3P58872 404 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 SUPT20HL1Q3ZLR7 823 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 TTC6Q86TZ1 520 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
TRBV20-1-201ENST00000390394 FAM227BQ96M60 508 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms