RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 CTNND2Q9UQB3 1225 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 FAM135BQ49AJ0 1406 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 DESP17661 470 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 CTNNA2P26232 953 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 MCM7P33993 719 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 MAP2K2P36507 400 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 KLHDC4Q8TBB5 520 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 USP44Q9H0E7 712 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 SMIM23A6NLE4 172 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 TRMT44Q8IYL2 757 aaKnown RBP9.74□□□□□ -0.85
PKP4-202ENST00000389759 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 RABGGTAQ92696 567 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 DDX12PQ92771 950 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 CABS1Q96KC9 395 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 RPGRIP1Q96KN7 1286 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 CDC5LQ99459 802 aaKnown RBP9.74□□□□□ -0.85
PKP4-202ENST00000389759 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
PKP4-202ENST00000389759 DESI2Q9BSY9 194 aa9.74□□□□□ -0.85
PKP4-202ENST00000389759 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
PKP4-202ENST00000389759 CDC25BP30305 580 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 WHAMMP3Q1A5X7 153 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 KRT40Q6A162 431 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 TBC1D5Q92609 795 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 WWC3Q9ULE0 1092 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 RBM5P52756 815 aaKnown RBP eCLIP9.73□□□□□ -0.85
PKP4-202ENST00000389759 HEATR3Q7Z4Q2 680 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 IFT20Q8IY31 132 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 UBLCP1Q8WVY7 318 aaPredicted RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 SECISBP2LQ93073 1101 aaKnown RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 GDAP1L1Q96MZ0 367 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 STAP2Q9UGK3 403 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 ABCC1P33527 1531 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 B4E1Z4 1266 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 TBCAO75347 108 aaKnown RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 DEXIO95424 95 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 PFKFB1P16118 471 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 GNAT2P19087 354 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 RBM6P78332 1123 aaKnown RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 NOC4LQ9BVI4 516 aaKnown RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 SPTLC3Q9NUV7 552 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 MTRF1LQ9UGC7 380 aaKnown RBP9.73□□□□□ -0.85
PKP4-202ENST00000389759 MAPK8IP1Q9UQF2 711 aa9.73□□□□□ -0.85
PKP4-202ENST00000389759 LACTBP83111 547 aaPredicted RBP9.72□□□□□ -0.85
PKP4-202ENST00000389759 PAK1Q13153 545 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 TNIP1Q15025 636 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 ZNF174Q15697 407 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 GRIPAP1Q4V328 841 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 MED4Q9NPJ6 270 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 SAR1BQ9Y6B6 198 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 KDM5DQ9BY66 1539 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 LDHCP07864 332 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 PPP1R2P41236 205 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CCDC51Q96ER9 411 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 PPP1R13BQ96KQ4 1090 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 TAB2Q9NYJ8 693 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 BAG3O95817 575 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CLNS1AP54105 237 aaKnown RBP9.72□□□□□ -0.85
PKP4-202ENST00000389759 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 RUFY4Q6ZNE9 571 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 SYCP3Q8IZU3 236 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CRACR2BQ8N4Y2 399 aaPredicted RBP9.72□□□□□ -0.85
PKP4-202ENST00000389759 LRRC45Q96CN5 670 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 VIMP08670 466 aaKnown RBP9.72□□□□□ -0.85
PKP4-202ENST00000389759 PNOCQ13519 176 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 TERF2Q15554 542 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CCDC50Q8IVM0 306 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CSGALNACT2Q8N6G5 542 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 CCDC26Q8TAB7 109 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 APPBP2Q92624 585 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 NUP58Q9BVL2 599 aa9.72□□□□□ -0.85
PKP4-202ENST00000389759 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
PKP4-202ENST00000389759 STX10O60499 249 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 NAPAP54920 295 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 MAP3K9P80192 1104 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 ZBTB16Q05516 673 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 PAK2Q13177 524 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 FAM71BQ8TC56 605 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 PLIN2Q99541 437 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.85
PKP4-202ENST00000389759 PDE11AQ9HCR9 933 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 IKBKGQ9Y6K9 419 aa9.71□□□□□ -0.85
PKP4-202ENST00000389759 A0A0D9SFI3 127 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 EYA2O00167 538 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 CMA1P23946 247 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 MAGEA1P43355 309 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 CUL5Q93034 780 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 PLEKHF1Q96S99 279 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 HOMER2Q9NSB8 354 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 FANCLQ9NW38 375 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 CTTNBP2Q8WZ74 1663 aa9.71□□□□□ -0.86
PKP4-202ENST00000389759 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms