RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
LTN1-203ENST00000389195 LAMB2P55268 1798 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 MAGEB6P1A0A0J9YX57 407 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 UFL1O94874 794 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 SLURP2P0DP57 97 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 CDC27P30260 824 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.49
LTN1-203ENST00000389195 CAMK4Q16566 473 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 FBXO33Q7Z6M2 555 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 POLLQ9UGP5 575 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 MYH7P12883 1935 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 C6orf229H3BNL8 230 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 POLRMTO00411 1230 aaKnown RBP11.96□□□□□ -0.49
LTN1-203ENST00000389195 PFKFB2O60825 505 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 NFXL1Q6ZNB6 911 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 TTC6Q86TZ1 520 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 KCNQ5Q9NR82 932 aa11.96□□□□□ -0.49
LTN1-203ENST00000389195 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 MMP10P09238 476 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 TRDNQ13061 729 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 GRAPQ13588 217 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 A0A087WWV3 80 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 USP17L21D6R901 530 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 RIOK1Q9BRS2 568 aaKnown RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 RBSNQ9H1K0 784 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 BAZ2AQ9UIF9 1905 aaKnown RBP11.95□□□□□ -0.5
LTN1-203ENST00000389195 MYH13Q9UKX3 1938 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 LRP5O75197 1615 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 RXRBP28702 533 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 NUP133Q8WUM0 1156 aa11.95□□□□□ -0.5
LTN1-203ENST00000389195 LY75O60449 1722 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 TMEM67Q5HYA8 995 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 ERCC4Q92889 916 aaPredicted RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 GUCY1A2P33402 732 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 SKOR2Q2VWA4 1001 aaPredicted RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 MFSD6Q6ZSS7 791 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 IGDCC4Q8TDY8 1250 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
LTN1-203ENST00000389195 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
LTN1-203ENST00000389195 CHRNA5P30532 468 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 ST5P78524 1137 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 SCN7AQ01118 1682 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■□□□□ 10.7
LTN1-203ENST00000389195 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
LTN1-203ENST00000389195 CPLX1O14810 134 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 LIG1P18858 919 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 PPARAQ07869 468 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 SLC44A5Q8NCS7 719 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 AGXT2Q9BYV1 514 aa11.93□□□□□ -0.5
LTN1-203ENST00000389195 AKNAD1Q5T1N1 836 aa11.92□□□□□ -0.5
LTN1-203ENST00000389195 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
LTN1-203ENST00000389195 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 ALDH8A1Q9H2A2 487 aaPredicted RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
LTN1-203ENST00000389195 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
LTN1-203ENST00000389195 SH3RF3Q8TEJ3 882 aaPredicted RBP11.92□□□□□ -0.5
LTN1-203ENST00000389195 PCDHAC2Q9Y5I4 1007 aa11.92□□□□□ -0.5
LTN1-203ENST00000389195 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
LTN1-203ENST00000389195 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 APOA5Q6Q788 366 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 SMARCC2Q8TAQ2 1214 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
LTN1-203ENST00000389195 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
LTN1-203ENST00000389195 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
LTN1-203ENST00000389195 IRS2Q9Y4H2 1338 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 GTF2IP78347 998 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 RESTQ13127 1097 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
LTN1-203ENST00000389195 MAPKAPK5Q8IW41 473 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 TBC1D16Q8TBP0 767 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 TGFBRAP1Q8WUH2 860 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
LTN1-203ENST00000389195 PGBD1Q96JS3 809 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 NACAP1Q9BZK3 213 aa11.9□□□□□ -0.5
LTN1-203ENST00000389195 CD209Q9NNX6 404 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms