RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 TSGA10Q9BZW7 698 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
ALK-201ENST00000389048 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 PDE4DQ08499 809 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
ALK-201ENST00000389048 RBSNQ9H1K0 784 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 OGFRQ9NZT2 677 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 GRM8O00222 908 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 HINFPQ9BQA5 517 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 RIOK3O14730 519 aaKnown RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 OTUD7BQ6GQQ9 843 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 SDCCAG8Q86SQ7 713 aaPredicted RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 ALDH3A1P30838 453 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 CCDC14Q49A88 953 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 C8orf74Q6P047 294 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 TMTC2Q8N394 836 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 DDX21Q9NR30 783 aaKnown RBP eCLIP17.39■□□□□ 0.37
ALK-201ENST00000389048 UTP11Q9Y3A2 253 aaKnown RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 KIF3CO14782 793 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 MAN1A1P33908 653 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 JAKMIP2Q96AA8 810 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
ALK-201ENST00000389048 NDUFAB1O14561 156 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 BMP15O95972 392 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 FYB2Q5VWT5 728 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 FNBP1Q96RU3 617 aa17.39■□□□□ 0.37
ALK-201ENST00000389048 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
ALK-201ENST00000389048 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 CLUL1Q15846 466 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 ZNF804AQ7Z570 1209 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 TACC3Q9Y6A5 838 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 EPB41P11171 864 aaKnown RBP17.38■□□□□ 0.37
ALK-201ENST00000389048 ITIH3Q06033 890 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 MYO1AQ9UBC5 1043 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 GAS8O95995 478 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 BSPRYQ5W0U4 402 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 CCDC26Q8TAB7 109 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
ALK-201ENST00000389048 B4E1Z4 1266 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 ASIC2Q16515 512 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 CASC4Q6P4E1 433 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 SV2BQ7L1I2 683 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
ALK-201ENST00000389048 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
ALK-201ENST00000389048 GOLGA6CA6NDK9 693 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 GOLGA6DP0CG33 693 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 GOLGA6AQ9NYA3 693 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 DYMQ7RTS9 669 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 NAPGQ99747 312 aaPredicted RBP17.37■□□□□ 0.37
ALK-201ENST00000389048 GBP1P32455 592 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 WDR44Q5JSH3 913 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 MYL10Q9BUA6 226 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
ALK-201ENST00000389048 ACEP12821 1306 aa17.37■□□□□ 0.37
ALK-201ENST00000389048 hCG_1642624A0A1W2PR95 340 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
ALK-201ENST00000389048 AFG3L2Q9Y4W6 797 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 TBC1D8BQ0IIM8 1120 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 ANKRD42Q8N9B4 389 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 MCUR1Q96AQ8 359 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 BICC1Q9H694 974 aaKnown RBP17.36■□□□□ 0.37
ALK-201ENST00000389048 RRAGDQ9NQL2 400 aaPredicted RBP17.36■□□□□ 0.37
ALK-201ENST00000389048 TXKP42681 527 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 TAB3Q8N5C8 712 aaPredicted RBP17.36■□□□□ 0.37
ALK-201ENST00000389048 STAMQ92783 540 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 FAM184BQ9ULE4 1060 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
ALK-201ENST00000389048 LRMPQ12912 555 aa17.36■□□□□ 0.37
ALK-201ENST00000389048 CASQ2O14958 399 aaPredicted RBP17.35■□□□□ 0.37
ALK-201ENST00000389048 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
ALK-201ENST00000389048 TRIM68Q6AZZ1 485 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 POLR2DO15514 142 aaKnown RBP17.35■□□□□ 0.37
ALK-201ENST00000389048 CAPN12Q6ZSI9 719 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 FAM135AQ9P2D6 1515 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
ALK-201ENST00000389048 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 NELFCDQ8IXH7 590 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 FRMD3A2A2Y4 597 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 MBD4O95243 580 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 INPP5BP32019 993 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 GNAQP50148 359 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 PRKG1Q13976 671 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 TSPYL6Q8N831 410 aa17.35■□□□□ 0.37
ALK-201ENST00000389048 ARMT1Q9H993 441 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 TAB2Q9NYJ8 693 aa17.34■□□□□ 0.37
ALK-201ENST00000389048 BIN2Q9UBW5 565 aaPredicted RBP17.34■□□□□ 0.37
ALK-201ENST00000389048 ASIC3Q9UHC3 531 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms