RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 MAP2K5Q13163 448 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 MCM6Q14566 821 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 MYLK4Q86YV6 388 aaPredicted RBP6.46□□□□□ -1.37
RFC1-202ENST00000381897 TMTC2Q8N394 836 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 SIL1Q9H173 461 aa6.46□□□□□ -1.37
RFC1-202ENST00000381897 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.46□□□□□ -1.37
RFC1-202ENST00000381897 FEZ2Q9UHY8 353 aaPredicted RBP6.46□□□□□ -1.37
RFC1-202ENST00000381897 ZNF76P36508 570 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 ATP6V1AP38606 617 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 CLCN6P51797 869 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 RBM6P78332 1123 aaKnown RBP6.46□□□□□ -1.38
RFC1-202ENST00000381897 DEUP1Q05D60 604 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 ACAP2Q15057 778 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 MSL1Q68DK7 614 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 RABEP2Q9H5N1 569 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 JRKLQ9Y4A0 524 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 KIAA1210Q9ULL0 1709 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 EBAG9O00559 213 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 SLC26A4O43511 780 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 SLC3A2P08195 630 aaKnown RBP6.46□□□□□ -1.38
RFC1-202ENST00000381897 MAP2K2P36507 400 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 RUFY3Q7L099 469 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 MRPS27Q92552 414 aaKnown RBP6.46□□□□□ -1.38
RFC1-202ENST00000381897 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
RFC1-202ENST00000381897 MEIS3Q99687 375 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 ST7Q9NRC1 585 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 SNX14Q9Y5W7 946 aa6.46□□□□□ -1.38
RFC1-202ENST00000381897 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 KIF4BQ2VIQ3 1234 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 UBR7Q8N806 425 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CCDC12Q8WUD4 166 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 C9orf78Q9NZ63 289 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 MTMR6Q9Y217 621 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 TIPRLO75663 272 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 KRT10P13645 584 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 MLLT3P42568 568 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 POLR2FP61218 127 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 ETF1P62495 437 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 RINLQ6ZS11 566 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CACTINQ8WUQ7 758 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 LEO1Q8WVC0 666 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 THUMPD2Q9BTF0 503 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 TFIP11Q9UBB9 837 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 DAAM1Q9Y4D1 1078 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CTAGE15A4D2H0 777 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 FAM86C2PA6NEL3 165 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 F5H423 210 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 GNPATO15228 680 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CTAGE8P0CG41 777 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 GBP6Q6ZN66 633 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CTAGE6Q86UF2 777 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CTAGE4Q8IX94 777 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 BANK1Q8NDB2 785 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 OTUD7AQ8TE49 926 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 RABGGTAQ92696 567 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 FTOQ9C0B1 505 aaKnown RBP eCLIP6.45□□□□□ -1.38
RFC1-202ENST00000381897 PSD3Q9NYI0 1048 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 ZRANB1Q9UGI0 708 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 SAMD9LQ8IVG5 1584 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 PREX2Q70Z35 1606 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 ATP2B4P23634 1241 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 KCNJ6P48051 423 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 SKOR1P84550 965 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 SKIV2LQ15477 1246 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 CCDC174Q6PII3 467 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 FAM47EQ6ZV65 393 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 AFAP1L1Q8TED9 768 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 ZMAT2Q96NC0 199 aaKnown RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 LBHD1Q9BQE6 289 aaPredicted RBP6.45□□□□□ -1.38
RFC1-202ENST00000381897 IL1RAPL2Q9NP60 686 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 MED4Q9NPJ6 270 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 HOMER2Q9NSB8 354 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 UBAP1Q9NZ09 502 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 USTQ9Y2C2 406 aa6.45□□□□□ -1.38
RFC1-202ENST00000381897 UGGT1Q9NYU2 1555 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 RIMS2Q9UQ26 1411 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 MAFGO15525 162 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SGSM2O43147 1006 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 LDHAP00338 332 aaKnown RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 CCDC144BQ3MJ40 725 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 TRIM22Q8IYM9 498 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 C8orf58Q8NAV2 365 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 KCNG4Q8TDN1 519 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 PPP1R13BQ96KQ4 1090 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 CARD6Q9BX69 1037 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 SYNCQ9H7C4 482 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
RFC1-202ENST00000381897 NEO1Q92859 1461 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 CDC42BPBQ9Y5S2 1711 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 ARHGAP6O43182 974 aa6.44□□□□□ -1.38
RFC1-202ENST00000381897 PSEN1P49768 467 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms