RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LDHCP07864 332 aa23.59■■□□□ 1.37
GTF3A-201ENST00000381140 BTDP43251 543 aa23.59■■□□□ 1.37
GTF3A-201ENST00000381140 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
GTF3A-201ENST00000381140 RASA3Q14644 834 aa23.59■■□□□ 1.37
GTF3A-201ENST00000381140 EDC3Q96F86 508 aaKnown RBP23.59■■□□□ 1.37
GTF3A-201ENST00000381140 GAKO14976 1311 aa23.58■■□□□ 1.37
GTF3A-201ENST00000381140 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.37
GTF3A-201ENST00000381140 NF2P35240 595 aa23.57■■□□□ 1.36
GTF3A-201ENST00000381140 TNNI2P48788 182 aa23.57■■□□□ 1.36
GTF3A-201ENST00000381140 TTLL12Q14166 644 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-201ENST00000381140 TTF1Q15361 905 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-201ENST00000381140 PAXIP1Q6ZW49 1069 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-201ENST00000381140 SMC5Q8IY18 1101 aa23.57■■□□□ 1.36
GTF3A-201ENST00000381140 NOL10Q9BSC4 688 aaKnown RBP23.57■■□□□ 1.36
GTF3A-201ENST00000381140 LNPKQ9C0E8 428 aa23.57■■□□□ 1.36
GTF3A-201ENST00000381140 GBA2Q9HCG7 927 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-201ENST00000381140 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
GTF3A-201ENST00000381140 MAP3K12Q12852 859 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 PRKG1Q13976 671 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 MAGEB6Q8N7X4 407 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 C2orf69Q8N8R5 385 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 HAUS7Q99871 368 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 PPP2R3BQ9Y5P8 575 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 CDK5RAP2Q96SN8 1893 aa23.56■■□□□ 1.36
GTF3A-201ENST00000381140 CYP7A1P22680 504 aa23.55■■□□□ 1.36
GTF3A-201ENST00000381140 FAM163AQ96GL9 167 aaPredicted RBP23.55■■□□□ 1.36
GTF3A-201ENST00000381140 TMEM39BQ9GZU3 492 aa23.55■■□□□ 1.36
GTF3A-201ENST00000381140 PAPPA2Q9BXP8 1791 aa23.55■■□□□ 1.36
GTF3A-201ENST00000381140 GPR75-ASB3A0A0A6YYF3 556 aa23.54■■□□□ 1.36
GTF3A-201ENST00000381140 MX1P20591 662 aa23.54■■□□□ 1.36
GTF3A-201ENST00000381140 TCP10Q12799 353 aa23.54■■□□□ 1.36
GTF3A-201ENST00000381140 TLL2Q9Y6L7 1015 aa23.54■■□□□ 1.36
GTF3A-201ENST00000381140 CNTNAP1P78357 1384 aa23.54■■□□□ 1.36
GTF3A-201ENST00000381140 NFIAQ12857 509 aa23.53■■□□□ 1.36
GTF3A-201ENST00000381140 GRM1Q13255 1194 aa23.53■■□□□ 1.36
GTF3A-201ENST00000381140 NBPF12Q5TAG4 269 aaPredicted RBP23.53■■□□□ 1.36
GTF3A-201ENST00000381140 MOB2Q70IA6 237 aa23.53■■□□□ 1.36
GTF3A-201ENST00000381140 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
GTF3A-201ENST00000381140 AATFQ9NY61 560 aaKnown RBP eCLIP23.53■■□□□ 1.36
GTF3A-201ENST00000381140 MAP4K4O95819 1239 aaPredicted RBP23.52■■□□□ 1.36
GTF3A-201ENST00000381140 HUNKP57058 714 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 CDAN1Q8IWY9 1227 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 FZD1Q9UP38 647 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 TTC41PQ6P2S7 1318 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 ERC2O15083 957 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 PICALMQ13492 652 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 DEFB115Q30KQ5 88 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 SUPT20HL1Q3ZLR7 823 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 FKBP1CQ5VVH2 108 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 SAPCD2Q86UD0 394 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 CHD1LQ86WJ1 897 aa23.52■■□□□ 1.36
GTF3A-201ENST00000381140 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.52■■□□□ 1.36
GTF3A-201ENST00000381140 SSC5DA1L4H1 1573 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 BAG3O95817 575 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 RGS3P49796 1198 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 NUCB1Q02818 461 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 SLC9C2Q5TAH2 1124 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 FAM83AQ86UY5 434 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 MIGA1Q8NAN2 632 aa23.51■■□□□ 1.35
GTF3A-201ENST00000381140 SH3RF3Q8TEJ3 882 aaPredicted RBP23.51■■□□□ 1.35
GTF3A-201ENST00000381140 UBE2Q2LH0YL09 131 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 PDE6AP16499 860 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 RHBDL3P58872 404 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 DYNLL1P63167 89 aaKnown RBP23.5■■□□□ 1.35
GTF3A-201ENST00000381140 TEX11Q8IYF3 940 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 DNAJC5GQ8N7S2 189 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 TEPSINQ96N21 525 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 FAM198AQ9UFP1 575 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 ANGEL1Q9UNK9 670 aaKnown RBP23.5■■□□□ 1.35
GTF3A-201ENST00000381140 FOCADQ5VW36 1801 aa23.5■■□□□ 1.35
GTF3A-201ENST00000381140 RASSF10A6NK89 507 aa23.49■■□□□ 1.35
GTF3A-201ENST00000381140 IGSF3O75054 1194 aa23.49■■□□□ 1.35
GTF3A-201ENST00000381140 GLRX3O76003 335 aaKnown RBP23.49■■□□□ 1.35
GTF3A-201ENST00000381140 PI4K2BQ8TCG2 481 aa23.49■■□□□ 1.35
GTF3A-201ENST00000381140 FAM151AQ8WW52 585 aa23.49■■□□□ 1.35
GTF3A-201ENST00000381140 KLRG1Q96E93 195 aa23.49■■□□□ 1.35
GTF3A-201ENST00000381140 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.49■■□□□ 1.35
GTF3A-201ENST00000381140 SALL3Q9BXA9 1300 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 CEP350Q5VT06 3117 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 WDHD1O75717 1129 aaPredicted RBP23.48■■□□□ 1.35
GTF3A-201ENST00000381140 CYP4F22Q6NT55 531 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 ARMC9Q7Z3E5 817 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 ZSCAN29Q8IWY8 852 aaPredicted RBP23.48■■□□□ 1.35
GTF3A-201ENST00000381140 ZFPM1Q8IX07 1006 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 DDX4Q9NQI0 724 aaKnown RBP23.48■■□□□ 1.35
GTF3A-201ENST00000381140 ZNF532Q9HCE3 1301 aa23.48■■□□□ 1.35
GTF3A-201ENST00000381140 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 PPP1R12BO60237 982 aaPredicted RBP23.47■■□□□ 1.35
GTF3A-201ENST00000381140 PLCG2P16885 1265 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 PDE1AP54750 535 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 FKBP1BP68106 108 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 SLFNL1Q499Z3 407 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 CCDC136Q96JN2 1154 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 IDI2Q9BXS1 227 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 MYH1P12882 1939 aa23.47■■□□□ 1.35
GTF3A-201ENST00000381140 RFX7Q2KHR2 1363 aa23.46■■□□□ 1.35
GTF3A-201ENST00000381140 VEGFBP49765 207 aa23.46■■□□□ 1.35
GTF3A-201ENST00000381140 CAPNS2Q96L46 248 aa23.46■■□□□ 1.35
GTF3A-201ENST00000381140 ENTPD3O75355 529 aa23.45■■□□□ 1.34
GTF3A-201ENST00000381140 PPP4CP60510 307 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms