RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 BSDC1Q9NW68 430 aaPredicted RBP20.12■□□□□ 0.81
PDX1-201ENST00000381033 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 NR1I2O75469 434 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 IRX3P78415 501 aaPredicted RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 FBXL16Q8N461 479 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 USP28Q96RU2 1077 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 SLC4A4Q9Y6R1 1079 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 RRP12Q5JTH9 1297 aaKnown RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 TMED8Q6PL24 325 aaPredicted RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 FAM84BQ96KN1 310 aaPredicted RBP20.11■□□□□ 0.81
PDX1-201ENST00000381033 ZSWIM5Q9P217 1185 aa20.11■□□□□ 0.81
PDX1-201ENST00000381033 ZNF384Q8TF68 577 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 PDLIM2Q96JY6 352 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
PDX1-201ENST00000381033 FUCA2Q9BTY2 467 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 LRRC4BQ9NT99 713 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
PDX1-201ENST00000381033 ELP1O95163 1332 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 GOLGA6L4A6NEF3 574 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 POLR3DP05423 398 aaPredicted RBP20.1■□□□□ 0.81
PDX1-201ENST00000381033 CYP7A1P22680 504 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 CDC27P30260 824 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 MEX3CQ5U5Q3 659 aaKnown RBP20.1■□□□□ 0.81
PDX1-201ENST00000381033 TXNRD3Q86VQ6 643 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 MICU3Q86XE3 530 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
PDX1-201ENST00000381033 LAMB2P55268 1798 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 PHKBQ93100 1093 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 TOMM22Q9NS69 142 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 ORC3Q9UBD5 711 aaPredicted RBP20.09■□□□□ 0.81
PDX1-201ENST00000381033 ANGEL1Q9UNK9 670 aaKnown RBP20.09■□□□□ 0.81
PDX1-201ENST00000381033 DOCK2Q92608 1830 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 EVX2Q03828 476 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 NAA16Q6N069 864 aaPredicted RBP20.09■□□□□ 0.81
PDX1-201ENST00000381033 IGDCC4Q8TDY8 1250 aa20.09■□□□□ 0.81
PDX1-201ENST00000381033 SH2B2O14492 632 aaPredicted RBP20.08■□□□□ 0.81
PDX1-201ENST00000381033 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
PDX1-201ENST00000381033 DYNLL1P63167 89 aaKnown RBP20.08■□□□□ 0.81
PDX1-201ENST00000381033 VPS37DQ86XT2 251 aa20.08■□□□□ 0.81
PDX1-201ENST00000381033 BICD2Q8TD16 824 aa20.08■□□□□ 0.81
PDX1-201ENST00000381033 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
PDX1-201ENST00000381033 ZSCAN16Q9H4T2 348 aaPredicted RBP20.08■□□□□ 0.81
PDX1-201ENST00000381033 USP25Q9UHP3 1055 aa20.08■□□□□ 0.81
PDX1-201ENST00000381033 ZNF804BA4D1E1 1349 aa20.08■□□□□ 0.8
PDX1-201ENST00000381033 CPLX1O14810 134 aa20.08■□□□□ 0.8
PDX1-201ENST00000381033 TDO2P48775 406 aa20.08■□□□□ 0.8
PDX1-201ENST00000381033 FAM193AP78312 1265 aa20.08■□□□□ 0.8
PDX1-201ENST00000381033 FAM196AQ6ZSG2 479 aa20.08■□□□□ 0.8
PDX1-201ENST00000381033 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 HSPA1LP34931 641 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 SLC10A5Q5PT55 438 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 RC3H1Q5TC82 1133 aaKnown RBP20.07■□□□□ 0.8
PDX1-201ENST00000381033 AFF2P51816 1311 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 TMEM132AQ24JP5 1023 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 APOA5Q6Q788 366 aa20.07■□□□□ 0.8
PDX1-201ENST00000381033 NPHP1O15259 732 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 LY9Q9HBG7 655 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 MINDY4BA8MYZ0 360 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 TM4SF1P30408 202 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 NUP62CLQ9H1M0 184 aa20.06■□□□□ 0.8
PDX1-201ENST00000381033 CLCN1P35523 988 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.8
PDX1-201ENST00000381033 ALX1Q15699 326 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 TMEM67Q5HYA8 995 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 SEPT12Q8IYM1 358 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 CMTR1Q8N1G2 835 aaKnown RBP20.05■□□□□ 0.8
PDX1-201ENST00000381033 C8orf76Q96K31 380 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 CLGNO14967 610 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 AP5Z1O43299 807 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 PLCB2Q00722 1185 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 AKNAD1Q5T1N1 836 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 TPTE2Q6XPS3 522 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 CCDC82Q8N4S0 544 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 GOLPH3LQ9H4A5 285 aa20.05■□□□□ 0.8
PDX1-201ENST00000381033 FAM217BQ9NTX9 383 aaPredicted RBP20.05■□□□□ 0.8
PDX1-201ENST00000381033 A0A087WWV3 80 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 RFC4P35249 363 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
PDX1-201ENST00000381033 SCN7AQ01118 1682 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 IFIT3O14879 490 aaKnown RBP20.04■□□□□ 0.8
PDX1-201ENST00000381033 PPP4R3BQ5MIZ7 849 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 MFSD6Q6ZSS7 791 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 FBXO18Q8NFZ0 1043 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.04■□□□□ 0.8
PDX1-201ENST00000381033 CFAP45Q9UL16 551 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 A0A1B0GUL6 1792 aa20.04■□□□□ 0.8
PDX1-201ENST00000381033 SPATA31A6Q5VVP1 1343 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
PDX1-201ENST00000381033 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 ERCC4Q92889 916 aaPredicted RBP20.03■□□□□ 0.8
PDX1-201ENST00000381033 TNMDQ9H2S6 317 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms