RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 MFSD14BQ5SR56 506 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 PHKBQ93100 1093 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 MTIF2P46199 727 aaKnown RBP14□□□□□ -0.17
GABPB1-203ENST00000380877 PTPN14Q15678 1187 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 RILPL1Q5EBL4 403 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 NEMFO60524 1076 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 HLFQ16534 295 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 WWC2Q6AWC2 1192 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 TRMT1LQ7Z2T5 733 aaKnown RBP14□□□□□ -0.17
GABPB1-203ENST00000380877 DIS3L2Q8IYB7 885 aaKnown RBP14□□□□□ -0.17
GABPB1-203ENST00000380877 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 PPARAQ07869 468 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
GABPB1-203ENST00000380877 TTLL11Q8NHH1 800 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 PI4K2BQ8TCG2 481 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 RUFY1Q96T51 708 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ANTXR1Q9H6X2 564 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 A0A1B0GVL5 298 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-203ENST00000380877 MCM7P33993 719 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 GTF2IP78347 998 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ADCK5Q3MIX3 580 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ZSCAN12O43309 604 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 HSP90B2PQ58FF3 399 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF589Q86UQ0 364 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-203ENST00000380877 TGFBRAP1Q8WUH2 860 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 LRRC27Q9C0I9 530 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 KIF2AO00139 706 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-203ENST00000380877 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 CACNA2D4Q7Z3S7 1137 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 AOPEPQ8N6M6 819 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 SDR42E1Q8WUS8 393 aa13.99□□□□□ -0.17
GABPB1-203ENST00000380877 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 RRAGBQ5VZM2 374 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 SMARCC2Q8TAQ2 1214 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 EXOC1Q9NV70 894 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF804BA4D1E1 1349 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 ATP2B4P23634 1241 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 PDE6BP35913 854 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 SUSD4Q5VX71 490 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 MTERF4Q7Z6M4 381 aaKnown RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 FAM160A1Q05DH4 1040 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 PI16Q6UXB8 463 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 SEPT11Q9NVA2 429 aaKnown RBP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 MATR3P43243 847 aaKnown RBP eCLIP13.98□□□□□ -0.17
GABPB1-203ENST00000380877 TFAP4Q01664 338 aa13.98□□□□□ -0.17
GABPB1-203ENST00000380877 CYP21A2P08686 494 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 BAG6P46379 1132 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 HSP90AA4PQ58FG1 418 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 KRT40Q6A162 431 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 POLR1AO95602 1720 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 KRT27Q7Z3Y8 459 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 RGS12O14924 1447 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 N4BP3O15049 544 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 UBASH3AP57075 661 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 ADCY9O60503 1353 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 UQCRHP07919 91 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 CCDC40Q4G0X9 1142 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 DTHD1Q6ZMT9 781 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
GABPB1-203ENST00000380877 SRP68Q9UHB9 627 aaKnown RBP13.97□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF174Q15697 407 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 MAP7D2Q96T17 732 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 SPA17Q15506 151 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 TEX35Q5T0J7 233 aa13.96□□□□□ -0.17
GABPB1-203ENST00000380877 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms