RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 DDX41Q9UJV9 622 aaKnown RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 PARP4Q9UKK3 1724 aaKnown RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 ZNF532Q9HCE3 1301 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 CPLX1O14810 134 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 ZNF202O95125 648 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 GTPBP4Q9BZE4 634 aaKnown RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 ITPK1Q13572 414 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 ZRSR1Q15695 479 aaKnown RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 MB21D2Q8IYB1 491 aaPredicted RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 MARCH10Q8NA82 808 aaPredicted RBP18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 CCDC87Q9NVE4 849 aa18.84■□□□□ 0.61
NKX3-1-201ENST00000380871 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 A0A1W2PQ27 194 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 A0A1W2PQ64 194 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 A0A1W2PQD8 194 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 WTIPA6NIX2 430 aaPredicted RBP18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 SLC3A2P08195 630 aaKnown RBP18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 PFKFB1P16118 471 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 SIK1P57059 783 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 FBXO38Q6PIJ6 1188 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 TJP1Q07157 1748 aa18.83■□□□□ 0.61
NKX3-1-201ENST00000380871 BCL9O00512 1426 aa18.83■□□□□ 0.6
NKX3-1-201ENST00000380871 GTF2E1P29083 439 aaPredicted RBP18.83■□□□□ 0.6
NKX3-1-201ENST00000380871 NCAPHQ15003 741 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 AXDND1Q5T1B0 1012 aaPredicted RBP18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 PPP1R13BQ96KQ4 1090 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 IL6STP40189 918 aaPredicted RBP18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 BCAMP50895 628 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 EVCP57679 992 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 GOLGA8FQ08AF8 430 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 GOLGA8DPQ0D2H9 430 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 FAM98CQ17RN3 349 aaKnown RBP18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 KCNG4Q8TDN1 519 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 MYL10Q9BUA6 226 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 OSBPL5Q9H0X9 879 aaPredicted RBP18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 SENP2Q9HC62 589 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 POLR3EQ9NVU0 708 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 KIF23Q02241 960 aaPredicted RBP18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 TRDNQ13061 729 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 SYT10Q6XYQ8 523 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 MAGEB6Q8N7X4 407 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 MIGA1Q8NAN2 632 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
NKX3-1-201ENST00000380871 B4E1Z4 1266 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 UTP14AQ9BVJ6 771 aaKnown RBP18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 NBPF3Q9H094 633 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 ABCF2Q9UG63 623 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 CCDC82Q8N4S0 544 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
NKX3-1-201ENST00000380871 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 SYNE3Q6ZMZ3 975 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 HSD3B7Q9H2F3 369 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 ARMT1Q9H993 441 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 PDE6AP16499 860 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 GSDMDP57764 484 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 NCOA7Q8NI08 942 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 DPF2Q92785 391 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 PHKBQ93100 1093 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 YEATS4O95619 227 aa18.8■□□□□ 0.6
NKX3-1-201ENST00000380871 SFPQP23246 707 aaKnown RBP eCLIP18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 ADD2P35612 726 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 CTDSPL2Q05D32 466 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 MICU3Q86XE3 530 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 ZKSCAN3Q9BRR0 538 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 PRKAB2O43741 272 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 PTF1AQ7RTS3 328 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 CLIC6Q96NY7 704 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
NKX3-1-201ENST00000380871 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 NLRP12P59046 1061 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 ERCC6LQ2NKX8 1250 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 TBC1D10CQ8IV04 446 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 ZNF34Q8IZ26 560 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 ZNF397Q8NF99 534 aaPredicted RBP18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 RIC1Q4ADV7 1423 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 LAMB4A4D0S4 1761 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 MBD4O95243 580 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 PNOCQ13519 176 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 RASGRF1Q13972 1273 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 C8orf37Q96NL8 207 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 SLC5A1P13866 664 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 ZNF446Q9NWS9 450 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 LRP2BPQ9P2M1 347 aa18.78■□□□□ 0.6
NKX3-1-201ENST00000380871 NUP188Q5SRE5 1749 aa18.77■□□□□ 0.6
NKX3-1-201ENST00000380871 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms