RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PUM3Q15397 648 aaKnown RBP18.05■□□□□ 0.48
COL2A1-202ENST00000380518 CLSTN2Q9H4D0 955 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 VEZTQ9HBM0 779 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 TRAF5O00463 557 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 MSANTD4Q8NCY6 345 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
COL2A1-202ENST00000380518 ITGA6P23229 1130 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 CCDC6Q16204 474 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 IGSF22Q8N9C0 903 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 IFT81Q8WYA0 676 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 ERO1AQ96HE7 468 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
COL2A1-202ENST00000380518 VPS18Q9P253 973 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 NCKAP5LQ9HCH0 1330 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 KCNA6P17658 529 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 CCT6AP40227 531 aaKnown RBP18.04■□□□□ 0.48
COL2A1-202ENST00000380518 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 KBTBD3Q8NAB2 608 aa18.04■□□□□ 0.48
COL2A1-202ENST00000380518 NOC4LQ9BVI4 516 aaKnown RBP18.04■□□□□ 0.48
COL2A1-202ENST00000380518 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 CFAP58Q5T655 872 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 TEX11Q8IYF3 940 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 MXRA7P84157 204 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 CALCOCO2Q13137 446 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 SELENOSQ9BQE4 189 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 CUTAO60888 179 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 EVCP57679 992 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 RAPGEF1Q13905 1077 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 CCDC121Q6ZUS5 278 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 DIS3L2Q8IYB7 885 aaKnown RBP18.03■□□□□ 0.48
COL2A1-202ENST00000380518 TRIM35Q9UPQ4 493 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 SSX2IPQ9Y2D8 614 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 GPAA1O43292 621 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 ZBTB16Q05516 673 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 XAGE2Q96GT9 111 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
COL2A1-202ENST00000380518 PPP2R3AQ06190 1150 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 NCBP1Q09161 790 aaKnown RBP18.02■□□□□ 0.48
COL2A1-202ENST00000380518 VWA3BQ502W6 1294 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 DCAF17Q5H9S7 520 aaPredicted RBP18.02■□□□□ 0.48
COL2A1-202ENST00000380518 HDXQ7Z353 690 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 FAM227BQ96M60 508 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 EDC4Q6P2E9 1401 aaKnown RBP18.02■□□□□ 0.48
COL2A1-202ENST00000380518 PDE4DQ08499 809 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 MLKLQ8NB16 471 aa18.02■□□□□ 0.48
COL2A1-202ENST00000380518 TLDC2A0PJX2 215 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 MSL1Q68DK7 614 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.47
COL2A1-202ENST00000380518 CNNM4Q6P4Q7 775 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 CPLX4Q7Z7G2 160 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.47
COL2A1-202ENST00000380518 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 FRMD4BQ9Y2L6 1034 aa18.02■□□□□ 0.47
COL2A1-202ENST00000380518 TUBB2AQ13885 445 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 TUBB2BQ9BVA1 445 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 V9GY48 417 aaPredicted RBP18.01■□□□□ 0.47
COL2A1-202ENST00000380518 ZNF445P59923 1031 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 FAM173BQ6P4H8 233 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 OTUD6BQ8N6M0 293 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 KLHDC4Q8TBB5 520 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 LEO1Q8WVC0 666 aaPredicted RBP18.01■□□□□ 0.47
COL2A1-202ENST00000380518 ARMT1Q9H993 441 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 ZEB2O60315 1214 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 PDE8AO60658 829 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 PSMD1Q99460 953 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 VPS16Q9H269 839 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 OGFRQ9NZT2 677 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 EPB41P11171 864 aaKnown RBP18.01■□□□□ 0.47
COL2A1-202ENST00000380518 HIBADHP31937 336 aaKnown RBP18.01■□□□□ 0.47
COL2A1-202ENST00000380518 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 SMC6Q96SB8 1091 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 SH2D4AQ9H788 454 aa18.01■□□□□ 0.47
COL2A1-202ENST00000380518 RIMBP2O15034 1052 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 FANCCQ00597 558 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 JAKMIP2Q96AA8 810 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 PLS1Q14651 629 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 PPP1R7Q15435 360 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 PIK3AP1Q6ZUJ8 805 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 FAM76AQ8TAV0 307 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 FAM212AQ96EL1 285 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 USP19O94966 1318 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 BACH1O14867 736 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
COL2A1-202ENST00000380518 NAPGQ99747 312 aaPredicted RBP18■□□□□ 0.47
COL2A1-202ENST00000380518 GLT8D2Q9H1C3 349 aa18■□□□□ 0.47
COL2A1-202ENST00000380518 PNMA6EA0A0J9YXQ4 647 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 CCDC26Q8TAB7 109 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 ZBTB21Q9ULJ3 1066 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 POLR2DO15514 142 aaKnown RBP17.99■□□□□ 0.47
COL2A1-202ENST00000380518 HAUS3Q68CZ6 603 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms