RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 EIF6P56537 245 aaKnown RBP33.12■■■□□ 2.89
TRAPPC10-202ENST00000380221 TNIP1Q15025 636 aa33.12■■■□□ 2.89
TRAPPC10-202ENST00000380221 TEKT1Q969V4 418 aa33.12■■■□□ 2.89
TRAPPC10-202ENST00000380221 NOL10Q9BSC4 688 aaKnown RBP33.12■■■□□ 2.89
TRAPPC10-202ENST00000380221 U3KPZ7 1027 aaPredicted RBP33.12■■■□□ 2.89
TRAPPC10-202ENST00000380221 CRKP46108 304 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 HHIPL2Q6UWX4 724 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 SDR42E1Q8WUS8 393 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 GSG1L2A8MUP6 293 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 PPP4CP60510 307 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 BECN1Q14457 450 aa33.11■■■□□ 2.89
TRAPPC10-202ENST00000380221 FGAP02671 866 aa33.1■■■□□ 2.89
TRAPPC10-202ENST00000380221 SLC4A3P48751 1232 aa33.1■■■□□ 2.89
TRAPPC10-202ENST00000380221 CREB3L3Q68CJ9 461 aa33.1■■■□□ 2.89
TRAPPC10-202ENST00000380221 SH3RF3Q8TEJ3 882 aaPredicted RBP33.1■■■□□ 2.89
TRAPPC10-202ENST00000380221 EPB41L4AQ9HCS5 686 aaPredicted RBP33.1■■■□□ 2.89
TRAPPC10-202ENST00000380221 ZNF541Q9H0D2 1346 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 AGBL3Q8NEM8 1001 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 MRIQ9BWK5 157 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 RNF181Q9P0P0 153 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 IFNL3Q8IZI9 196 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 CRNKL1Q9BZJ0 848 aaKnown RBP33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 PCDHAC2Q9Y5I4 1007 aa33.09■■■□□ 2.89
TRAPPC10-202ENST00000380221 SLC27A2O14975 620 aa33.08■■■□□ 2.89
TRAPPC10-202ENST00000380221 HDLBPQ00341 1268 aaKnown RBP33.08■■■□□ 2.89
TRAPPC10-202ENST00000380221 RASEFQ8IZ41 740 aa33.08■■■□□ 2.89
TRAPPC10-202ENST00000380221 RBM5P52756 815 aaKnown RBP eCLIP33.07■■■□□ 2.88
TRAPPC10-202ENST00000380221 SERPINA10Q9UK55 444 aa33.07■■■□□ 2.88
TRAPPC10-202ENST00000380221 GJA3Q9Y6H8 435 aa33.07■■■□□ 2.88
TRAPPC10-202ENST00000380221 SNX14Q9Y5W7 946 aa33.06■■■□□ 2.88
TRAPPC10-202ENST00000380221 RHBDL3P58872 404 aa33.06■■■□□ 2.88
TRAPPC10-202ENST00000380221 APOBEC3HQ6NTF7 200 aaKnown RBP33.06■■■□□ 2.88
TRAPPC10-202ENST00000380221 ZDHHC15Q96MV8 337 aa33.06■■■□□ 2.88
TRAPPC10-202ENST00000380221 GRIN3BO60391 1043 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 CYP21A2P08686 494 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 C9orf131Q5VYM1 1079 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 KCNB2Q92953 911 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 CTNNA3Q9UI47 895 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 TAF6LQ9Y6J9 622 aa33.05■■■□□ 2.88
TRAPPC10-202ENST00000380221 USP17L8P0C7I0 530 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 ALX1Q15699 326 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 RNF20Q5VTR2 975 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 CERS3Q8IU89 383 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 OGFOD1Q8N543 542 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 TBC1D2Q9BYX2 928 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 NACAP1Q9BZK3 213 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 NAPBQ9H115 298 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 TIAM2Q8IVF5 1701 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 RPAP1Q9BWH6 1393 aaPredicted RBP33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 ANAPC15P60006 121 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 CFAP100Q494V2 611 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 HDAC9Q9UKV0 1011 aa33.04■■■□□ 2.88
TRAPPC10-202ENST00000380221 PLCG2P16885 1265 aa33.03■■■□□ 2.88
TRAPPC10-202ENST00000380221 TDO2P48775 406 aa33.03■■■□□ 2.88
TRAPPC10-202ENST00000380221 CDK5RAP2Q96SN8 1893 aa33.02■■■□□ 2.88
TRAPPC10-202ENST00000380221 ZKSCAN1P17029 563 aaPredicted RBP33.02■■■□□ 2.88
TRAPPC10-202ENST00000380221 TEX11Q8IYF3 940 aa33.02■■■□□ 2.88
TRAPPC10-202ENST00000380221 TGFBRAP1Q8WUH2 860 aa33.02■■■□□ 2.88
TRAPPC10-202ENST00000380221 GMPSP49915 693 aaPredicted RBP33.01■■■□□ 2.88
TRAPPC10-202ENST00000380221 HAND2P61296 217 aa33.01■■■□□ 2.88
TRAPPC10-202ENST00000380221 DCP1AQ9NPI6 582 aaPredicted RBP33.01■■■□□ 2.88
TRAPPC10-202ENST00000380221 USP40Q9NVE5 1235 aa33.01■■■□□ 2.88
TRAPPC10-202ENST00000380221 ZMYM6O95789 1325 aa33.01■■■□□ 2.88
TRAPPC10-202ENST00000380221 BAZ2AQ9UIF9 1905 aaKnown RBP33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 SHTN1A0MZ66 631 aa33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 RPS12P25398 132 aaKnown RBP33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 USP5P45974 858 aa33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 CDC42EP5Q6NZY7 148 aa33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 ATP8A2Q9NTI2 1148 aa33.01■■■□□ 2.87
TRAPPC10-202ENST00000380221 RABEP1Q15276 862 aa33■■■□□ 2.87
TRAPPC10-202ENST00000380221 IMMTQ16891 758 aaKnown RBP33■■■□□ 2.87
TRAPPC10-202ENST00000380221 GIMAP6Q6P9H5 292 aa32.99■■■□□ 2.87
TRAPPC10-202ENST00000380221 IL17RAQ96F46 866 aa32.99■■■□□ 2.87
TRAPPC10-202ENST00000380221 ZNF213O14771 459 aa32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 ADCK5Q3MIX3 580 aa32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 PRMT6Q96LA8 375 aaPredicted RBP32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 MAPKAPK5Q8IW41 473 aa32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 SNX21Q969T3 373 aa32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 MKRN1Q9UHC7 482 aaKnown RBP32.98■■■□□ 2.87
TRAPPC10-202ENST00000380221 TSGA10IPQ3SY00 556 aa32.97■■■□□ 2.87
TRAPPC10-202ENST00000380221 GPC2Q8N158 579 aa32.97■■■□□ 2.87
TRAPPC10-202ENST00000380221 DPF2Q92785 391 aa32.97■■■□□ 2.87
TRAPPC10-202ENST00000380221 ECM29Q5VYK3 1845 aa32.97■■■□□ 2.87
TRAPPC10-202ENST00000380221 DLGAP5Q15398 846 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 HSCBQ8IWL3 235 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 CTR9Q6PD62 1173 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 NBPF3Q9H094 633 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 LAMA4Q16363 1823 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 FOCADQ5VW36 1801 aa32.96■■■□□ 2.87
TRAPPC10-202ENST00000380221 SPDYE2BA6NHP3 402 aa32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 WDHD1O75717 1129 aaPredicted RBP32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 SPDYE6P0CI01 402 aa32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 MICALL2Q8IY33 904 aa32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 TDRD3Q9H7E2 651 aaKnown RBP32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 MCM9Q9NXL9 1143 aa32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 CNOT7Q9UIV1 285 aaKnown RBP32.95■■■□□ 2.87
TRAPPC10-202ENST00000380221 FLT1P17948 1338 aa32.94■■■□□ 2.86
TRAPPC10-202ENST00000380221 MINDY4BA8MYZ0 360 aa32.94■■■□□ 2.86
TRAPPC10-202ENST00000380221 USP17L12C9JPN9 530 aa32.94■■■□□ 2.86
TRAPPC10-202ENST00000380221 USP17L21D6R901 530 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms