RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 TAOK2Q9UL54 1235 aa22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 ALG1Q9BT22 464 aa22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 BCORQ6W2J9 1755 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 FGFR2P21802 821 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 SYNE3Q6ZMZ3 975 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 PHKBQ93100 1093 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 EPB41L4AQ9HCS5 686 aaPredicted RBP22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 SNAP23O00161 211 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 WDHD1O75717 1129 aaPredicted RBP22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 MICU3Q86XE3 530 aa22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 STRBPQ96SI9 672 aaKnown RBP22.67■■□□□ 1.22
SHROOM1-202ENST00000378676 PFKFB1P16118 471 aa22.66■■□□□ 1.22
SHROOM1-202ENST00000378676 PUM3Q15397 648 aaKnown RBP22.66■■□□□ 1.22
SHROOM1-202ENST00000378676 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
SHROOM1-202ENST00000378676 TACC3Q9Y6A5 838 aa22.66■■□□□ 1.22
SHROOM1-202ENST00000378676 UQCRFS1P1P0C7P4 283 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 MYL10Q9BUA6 226 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 BIN1O00499 593 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 ZNF202O95125 648 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 MARCKSP29966 332 aaPredicted RBP22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 KRT40Q6A162 431 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 FILIP1Q7Z7B0 1213 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 VPS37DQ86XT2 251 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 ZNF34Q8IZ26 560 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 PRDM4Q9UKN5 801 aa22.65■■□□□ 1.22
SHROOM1-202ENST00000378676 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 USP27XA6NNY8 438 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 RANBP6O60518 1105 aaKnown RBP22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 TNNT1P13805 278 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 NBPF11Q86T75 865 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 IGDCC4Q8TDY8 1250 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 LPIN2Q92539 896 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 AIDAQ96BJ3 306 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 NAT10Q9H0A0 1025 aaKnown RBP22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 LY9Q9HBG7 655 aa22.64■■□□□ 1.22
SHROOM1-202ENST00000378676 CCDC69A6NI79 296 aa22.64■■□□□ 1.21
SHROOM1-202ENST00000378676 UBE2Q2LH0YL09 131 aa22.64■■□□□ 1.21
SHROOM1-202ENST00000378676 CCZ1BP86790 482 aa22.64■■□□□ 1.21
SHROOM1-202ENST00000378676 CCZ1P86791 482 aaPredicted RBP22.64■■□□□ 1.21
SHROOM1-202ENST00000378676 ERVV-1B6SEH8 477 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 CTIFO43310 598 aaKnown RBP22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 CTDSPL2Q05D32 466 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 RASGRF1Q13972 1273 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 SLC39A14Q15043 492 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 NTRK3Q16288 839 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 FAM217BQ9NTX9 383 aaPredicted RBP22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 LAMB2P55268 1798 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 MROH5Q6ZUA9 1318 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 MBD4O95243 580 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 SLC3A2P08195 630 aaKnown RBP22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 CMA1P23946 247 aa22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 TPD52L1Q16890 204 aaPredicted RBP22.63■■□□□ 1.21
SHROOM1-202ENST00000378676 ZBTB43O43298 467 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 MAGEB6Q8N7X4 407 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 TMEM87BQ96K49 555 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 COL4A1P02462 1669 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 MYH6P13533 1939 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 CDKL5O76039 1030 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 BPIFA3Q9BQP9 254 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 ARMT1Q9H993 441 aa22.62■■□□□ 1.21
SHROOM1-202ENST00000378676 GOLGA8AA7E2F4 631 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 NLRP12P59046 1061 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 PTPAQ15257 358 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 ALX1Q15699 326 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 TMEM67Q5HYA8 995 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 NFXL1Q6ZNB6 911 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 IFNL3Q8IZI9 196 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 SMTNL1A8MU46 457 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 NEMFO60524 1076 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 SKILP12757 684 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 SUSD4Q5VX71 490 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 RGS22Q8NE09 1264 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 SEC31BQ9NQW1 1179 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 A0A1B0GUL6 1792 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
SHROOM1-202ENST00000378676 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 SLC5A1P13866 664 aa22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 SGMS1Q86VZ5 419 aa22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 CCDC94Q9BW85 323 aaPredicted RBP22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 MYH14Q7Z406 1995 aaKnown RBP22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 PATL2C9JE40 543 aaKnown RBP22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 ZRSR1Q15695 479 aaKnown RBP22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 SHC4Q6S5L8 630 aa22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 MAP3K14Q99558 947 aa22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 NAPBQ9H115 298 aa22.6■■□□□ 1.21
SHROOM1-202ENST00000378676 IARSP41252 1262 aaKnown RBP22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 NCAPHQ15003 741 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 ISM2Q6H9L7 571 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 ANKRD7Q92527 254 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 XPO4Q9C0E2 1151 aaKnown RBP22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 ZSWIM5Q9P217 1185 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 HPSEQ9Y251 543 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 RREB1Q92766 1687 aa22.59■■□□□ 1.21
SHROOM1-202ENST00000378676 PRKAB2O43741 272 aa22.58■■□□□ 1.21
SHROOM1-202ENST00000378676 CPLX2Q6PUV4 134 aaKnown RBP22.58■■□□□ 1.21
SHROOM1-202ENST00000378676 GSG1L2A8MUP6 293 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms