RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 MEFVO15553 781 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 DNAJC8O75937 253 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 GJA8P48165 433 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 ATP11AP98196 1134 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 STK3Q13188 491 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 TAF7Q15545 349 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.25□□□□□ -0.29
NPHP4-202ENST00000378161 FBLN1P23142 703 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 ME1P48163 572 aa13.25□□□□□ -0.29
NPHP4-202ENST00000378161 MAP7Q14244 749 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 MYSM1Q5VVJ2 828 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 ZRANB2O95218 330 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPHP4-202ENST00000378161 CLTAP09496 248 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 STK38Q15208 465 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 PRPF40BQ6NWY9 871 aaKnown RBP13.24□□□□□ -0.29
NPHP4-202ENST00000378161 C16orf71Q8IYS4 520 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-202ENST00000378161 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
NPHP4-202ENST00000378161 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 EPC1Q9H2F5 836 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 MMADHCQ9H3L0 296 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 DYTNA2CJ06 578 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 NLRP5P59047 1200 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 WASHC4Q2M389 1173 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 NYAP1Q6ZVC0 841 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 DRAXINQ8NBI3 349 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 ABTB1Q969K4 478 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 GNAT1P11488 350 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 PSMC4P43686 418 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 CKAP4Q07065 602 aaKnown RBP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 COQ9O75208 318 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 UBASH3AP57075 661 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 CEP85Q6P2H3 762 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-202ENST00000378161 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
NPHP4-202ENST00000378161 GOLGA8KD6RF30 607 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
NPHP4-202ENST00000378161 FAM160A1Q05DH4 1040 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 TBC1D8BQ0IIM8 1120 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 CCDC6Q16204 474 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 AMOTL1Q8IY63 956 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 E7EVH7 732 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 AHCYL1O43865 530 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 PYGLP06737 847 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 IMPDH2P12268 514 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 SIL1Q9H173 461 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 KDM5DQ9BY66 1539 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 HNRNPCP07910 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPHP4-202ENST00000378161 GJB2P29033 226 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
NPHP4-202ENST00000378161 ZNF569Q5MCW4 686 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 THEMIS2Q5TEJ8 643 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 FAXDC2Q96IV6 333 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
NPHP4-202ENST00000378161 RBM47A0AV96 593 aaKnown RBP13.21□□□□□ -0.29
NPHP4-202ENST00000378161 ARHGAP6O43182 974 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
NPHP4-202ENST00000378161 TAF11Q15544 211 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 Q4G0T1 1027 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-202ENST00000378161 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 TRIML1Q8N9V2 468 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 VCAM1P19320 739 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 OLFML1Q6UWY5 402 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 CLSTN2Q9H4D0 955 aa13.21□□□□□ -0.29
NPHP4-202ENST00000378161 E2F6O75461 281 aa13.21□□□□□ -0.3
NPHP4-202ENST00000378161 DDR1Q08345 913 aa13.21□□□□□ -0.3
NPHP4-202ENST00000378161 ARID5BQ14865 1188 aa13.21□□□□□ -0.3
NPHP4-202ENST00000378161 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.3
NPHP4-202ENST00000378161 SYNMO15061 1565 aa13.21□□□□□ -0.3
NPHP4-202ENST00000378161 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms