RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 LONRF2Q1L5Z9 754 aa11.42□□□□□ -0.58
RNF38-206ENST00000377885 RSPH14Q9UHP6 348 aa11.42□□□□□ -0.58
RNF38-206ENST00000377885 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
RNF38-206ENST00000377885 ADKP55263 362 aaKnown RBP11.42□□□□□ -0.58
RNF38-206ENST00000377885 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
RNF38-206ENST00000377885 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
RNF38-206ENST00000377885 CRACR2AQ9BSW2 395 aa11.42□□□□□ -0.58
RNF38-206ENST00000377885 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 RUFY1Q96T51 708 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 UTYO14607 1347 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 ZNF609O15014 1411 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 CTDNEP1O95476 244 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 KIF23Q02241 960 aaPredicted RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 KRT40Q6A162 431 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 VPS37DQ86XT2 251 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
RNF38-206ENST00000377885 IQCEQ6IPM2 695 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 NCAPD2Q15021 1401 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 A0A1B0GUL7 405 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 PRAMEF22A3QJZ6 481 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 IGKV5-2P06315 115 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 STK11IPQ8N1F8 1099 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 C19orf44Q9H6X5 657 aa11.41□□□□□ -0.58
RNF38-206ENST00000377885 RHOXF2BP0C7M4 288 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 ACTN2P35609 894 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 SRGAP1Q7Z6B7 1085 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 CNGA4Q8IV77 575 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 NUP88Q99567 741 aaPredicted RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 RHOXF2Q9BQY4 288 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 MKRN1Q9UHC7 482 aaKnown RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 POSTNQ15063 836 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 ANGEL1Q9UNK9 670 aaKnown RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
RNF38-206ENST00000377885 IGSF22Q8N9C0 903 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 MAST3O60307 1309 aa11.4□□□□□ -0.58
RNF38-206ENST00000377885 CCDC196A0A1B0GTZ2 297 aa11.4□□□□□ -0.59
RNF38-206ENST00000377885 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.59
RNF38-206ENST00000377885 DESI2Q9BSY9 194 aa11.4□□□□□ -0.59
RNF38-206ENST00000377885 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.59
RNF38-206ENST00000377885 EYA2O00167 538 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 RRP12Q5JTH9 1297 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 DHX58Q96C10 678 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 NAPGQ99747 312 aaPredicted RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 MRFAP1Q9Y605 127 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 RIMS1Q86UR5 1692 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 CTCFLQ8NI51 663 aaPredicted RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 ADAM21Q9UKJ8 722 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 PDE11AQ9HCR9 933 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 ZCCHC17Q9NP64 241 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 CDC23Q9UJX2 597 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 RRP15Q9Y3B9 282 aaKnown RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 PEAK1Q9H792 1746 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
RNF38-206ENST00000377885 SKIDA1Q1XH10 827 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 APPBP2Q92624 585 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
RNF38-206ENST00000377885 USP8P40818 1118 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 SLC20A2Q08357 652 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 TRIML1Q8N9V2 468 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 LRRN4CLQ8ND94 238 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 MYO1CO00159 1063 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 COL9A3Q14050 684 aaPredicted RBP11.38□□□□□ -0.59
RNF38-206ENST00000377885 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
RNF38-206ENST00000377885 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 N4BP3O15049 544 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 PHACTR2O75167 634 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 SLC52A2Q9HAB3 445 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
RNF38-206ENST00000377885 POLR2DO15514 142 aaKnown RBP11.38□□□□□ -0.59
RNF38-206ENST00000377885 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
RNF38-206ENST00000377885 SPAG1Q07617 926 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 WHAMMP3Q1A5X7 153 aa11.38□□□□□ -0.59
RNF38-206ENST00000377885 RILPL1Q5EBL4 403 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms